RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 FADS2O95864 444 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 OCM2P0CE71 109 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 OCMP0CE72 109 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 LMO1P25800 156 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 DYNLT3P51808 116 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 SNU13P55769 128 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 DYNC1I2Q13409 638 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 FAM189A2Q15884 450 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 MINOS1Q5TGZ0 78 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 Q6ZTK2 550 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 SAXO1Q8IYX7 474 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 KLHDC1Q8N7A1 406 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 OR5D18Q8NGL1 313 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 RPS4Y2Q8TD47 263 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 Q96MT0 163 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 TMEM133Q9H2Q1 129 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 ZCCHC4Q9H5U6 513 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 RHOFQ9HBH0 211 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 S100A14Q9HCY8 104 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 EXOSC4Q9NPD3 245 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 INPP5EQ9NRR6 644 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 MRPS18AQ9NVS2 196 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 ERVK13-1Q9NX77 482 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 FOXJ3Q9UPW0 622 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 GSTK1Q9Y2Q3 226 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 MINOS1-NBL1R4GNA1 71 aa16.38■□□□□ 0.21
NCKIPSD-206ENST00000439518 TET2Q6N021 2002 aaPredicted RBP16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 IGHV2-26A0A0B4J1V2 119 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 SIRPB1O00241 398 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 MMP23AO75900 390 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 ALX3O95076 343 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 ZFPL1O95159 310 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 OR2H2O95918 312 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 RPSAP08865 295 aaKnown RBP16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 RAB40BQ12829 278 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 ZBTB49Q6ZSB9 765 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 Q8N2B8 174 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 PARP16Q8N5Y8 322 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 FAM110DQ8TAY7 271 aaPredicted RBP16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 ZNF702PQ9H963 129 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 ABCB10Q9NRK6 738 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 FAM118AQ9NWS6 357 aa16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 UBE2J1Q9Y385 318 aaPredicted RBP16.37■□□□□ 0.21
NCKIPSD-206ENST00000439518 LOC100130705A0A1B0GUX0 176 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 TMEM212A6NML5 194 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 CSF1P09603 554 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 MRPL28Q13084 256 aaKnown RBP16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 PQLC1Q8N2U9 271 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 OR52I1Q8NGK6 324 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 OR5D14Q8NGL3 314 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 CORO2AQ92828 525 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 NKX3-1Q99801 234 aaPredicted RBP16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 CLEC7AQ9BXN2 247 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 NEK6Q9HC98 313 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 PITPNC1Q9UKF7 332 aa16.36■□□□□ 0.21
NCKIPSD-206ENST00000439518 A0A0G2JK05 382 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 SULT1B1O43704 296 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 JUNBP17275 347 aaPredicted RBP16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 ZP1P60852 638 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 Q6P435 159 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 TMEM219Q86XT9 240 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 SERPINA12Q8IW75 414 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 OR5AK2Q8NH90 309 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 APH1BQ8WW43 257 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 PDCD1LG2Q9BQ51 273 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 SERTAD4Q9NUC0 356 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 RPL36Q9Y3U8 105 aaKnown RBP16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 HILPDAQ9Y5L2 63 aa16.35■□□□□ 0.21
NCKIPSD-206ENST00000439518 KIAA2026Q5HYC2 2103 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 CSN2P05814 226 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 CCDC159P0C7I6 412 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 LIMS3P0CW19 117 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 LIMS4P0CW20 117 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 VSIG10L2P0DP72 767 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 GLIPR1P48060 266 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 AESQ08117 197 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 HABP2Q14520 560 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 CDK5R1Q15078 307 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 KISS1Q15726 138 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 HIST2H2BDQ6DRA6 164 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 HEPN1Q6WQI6 88 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 TRAPPC6BQ86SZ2 158 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 C11orf44Q8N8P7 122 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 CHST4Q8NCG5 386 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 OR4P4Q8NGL7 312 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 NDNFQ8TB73 568 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 TAS2R3Q9NYW6 316 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 PCDHGB5Q9Y5G0 923 aa16.34■□□□□ 0.21
NCKIPSD-206ENST00000439518 TRGV10A0A0A0MS01 117 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 FUOMA2VDF0 154 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 FAM90A22PA8MWA6 464 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 TMEM225BP0DP42 221 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 GBX2P52951 348 aaPredicted RBP16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 SLC34A1Q06495 639 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 IL18R1Q13478 541 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 KLHL22Q53GT1 634 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 PRAMEF5Q5TYX0 476 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 ZNF529Q6P280 563 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 BAIAP2L2Q6UXY1 529 aa16.33■□□□□ 0.2
NCKIPSD-206ENST00000439518 COQ2Q96H96 371 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms