RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 UEVLDQ8IX04 471 aa11.77□□□□□ -0.52
PCNX3-202ENST00000439247 OR10AD1Q8NGE0 317 aa11.77□□□□□ -0.52
PCNX3-202ENST00000439247 C18orf12Q96KH6 178 aa11.77□□□□□ -0.52
PCNX3-202ENST00000439247 SNX22Q96L94 193 aa11.77□□□□□ -0.52
PCNX3-202ENST00000439247 FRYQ5TBA9 3013 aa11.77□□□□□ -0.52
PCNX3-202ENST00000439247 OR5H1A6NKK0 313 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 M0R296 226 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 LAMTOR5O43504 91 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 PGA5P0DJD9 388 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 PNLIPP16233 465 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 DCAF7P61962 342 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 TLE1Q04724 770 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 SLC22A25Q6T423 547 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 C1orf210Q8IVY1 113 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 TMEM123Q8N131 208 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 OR2AE1Q8NHA4 323 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 LMX1AQ8TE12 382 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 OIT3Q8WWZ8 545 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 GLRX2Q9NS18 164 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 KLHL13Q9P2N7 655 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 FOXD3Q9UJU5 478 aaPredicted RBP11.77□□□□□ -0.53
PCNX3-202ENST00000439247 FAM230AA0A1W2PPH8 454 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 BTBD17A6NE02 478 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 VSTM2BA6NLU5 285 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 GEMIN2O14893 280 aaKnown RBP11.77□□□□□ -0.53
PCNX3-202ENST00000439247 SSSCA1O60232 199 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 MYF5P13349 255 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 DUSP1P28562 367 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 GPR157Q5UAW9 335 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 LIAT1Q6ZQX7 453 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 FBXL14Q8N1E6 418 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF441Q8N8Z8 693 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF160Q9HCG1 818 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 MMACHCQ9Y4U1 282 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 WSB1Q9Y6I7 421 aa11.77□□□□□ -0.53
PCNX3-202ENST00000439247 GPR179Q6PRD1 2367 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 BCAT2O15382 392 aaPredicted RBP11.76□□□□□ -0.53
PCNX3-202ENST00000439247 TRAF3IP2O43734 574 aaPredicted RBP11.76□□□□□ -0.53
PCNX3-202ENST00000439247 IGHG1P01857 330 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 NXPH1P58417 271 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF124Q15973 351 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 DEFB133Q30KQ1 61 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 PIGYQ3MUY2 71 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 CXorf66Q5JRM2 361 aaPredicted RBP11.76□□□□□ -0.53
PCNX3-202ENST00000439247 REC114Q7Z4M0 266 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 OR2C3Q8N628 320 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 OR1L3Q8NH93 324 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 DNASE2BQ8WZ79 361 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 MVB12AQ96EY5 273 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 ZDHHC12Q96GR4 267 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 PPP4R1LQ9P1A2 415 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 ANKUB1A6NFN9 424 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 PHOX2AO14813 284 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 SCAF4O95104 1147 aaKnown RBP11.76□□□□□ -0.53
PCNX3-202ENST00000439247 FUT3P21217 361 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 CCL1P22362 96 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 RNF4P78317 190 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF880Q6PDB4 577 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 Q6ZPA2 131 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 OR5C1Q8NGR4 320 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 ARHGAP21Q5T5U3 1957 aa11.76□□□□□ -0.53
PCNX3-202ENST00000439247 SLC31A2O15432 143 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 CYB5R2Q6BCY4 276 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 D2HGDHQ8N465 521 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 CA5BP1Q8WTZ4 195 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 Q96M66 194 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 TM2D1Q9BX74 207 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 ALKBH4Q9NXW9 302 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 CACNA1EQ15878 2313 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 PROB1E7EW31 1015 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 PI4KAP42356 2102 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 MTCP1P56278 107 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 LPAL2Q16609 132 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 RSPO1Q2MKA7 263 aaPredicted RBP11.75□□□□□ -0.53
PCNX3-202ENST00000439247 SNAI3Q3KNW1 292 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 NKAIN1Q4KMZ8 207 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 PHYHD1Q5SRE7 291 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.75□□□□□ -0.53
PCNX3-202ENST00000439247 SLC25A47Q6Q0C1 308 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 ODF3L1Q8IXM7 274 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 LFNGQ8NES3 379 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 POC1BQ8TC44 478 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 PACRGQ96M98 296 aaPredicted RBP11.75□□□□□ -0.53
PCNX3-202ENST00000439247 CALHM2Q9HA72 323 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 DECR2Q9NUI1 292 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 KLRF1Q9NZS2 232 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 IGKV1-27A0A075B6S5 117 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 RRP8O43159 456 aaKnown RBP11.75□□□□□ -0.53
PCNX3-202ENST00000439247 TMEM50AO95807 157 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 MMP9P14780 707 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 FBLP22087 321 aaKnown RBP11.75□□□□□ -0.53
PCNX3-202ENST00000439247 IL2RGP31785 369 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 DYNLT3P51808 116 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 GNMTQ14749 295 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF385CQ66K41 422 aaPredicted RBP11.75□□□□□ -0.53
PCNX3-202ENST00000439247 HAS2Q92819 552 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 TVP23CQ96ET8 276 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 NIPSNAP3BQ9BS92 247 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms