RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 OR5M8Q8NGP6 311 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 OR5B3Q8NH48 314 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 FAM168AQ92567 244 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 FXYD1O00168 92 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 TSPAN2O60636 221 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 FBP1P09467 338 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 ACSM4P0C7M7 580 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 SLC16A12Q6ZSM3 486 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 CENPVQ7Z7K6 275 aaPredicted RBP10.59□□□□□ -0.71
NEK1-201ENST00000439128 ZNF764Q96H86 408 aaPredicted RBP10.59□□□□□ -0.71
NEK1-201ENST00000439128 LINC00052Q96N35 136 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 ZNF331Q9NQX6 463 aaPredicted RBP10.59□□□□□ -0.71
NEK1-201ENST00000439128 MIOXQ9UGB7 285 aa10.59□□□□□ -0.71
NEK1-201ENST00000439128 LOC105371242A0A075B767 164 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 NKX2-6A6NCS4 301 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 TBR1Q16650 682 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 BLNKQ8WV28 456 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 VWCEQ96DN2 955 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 ZNF436Q9C0F3 470 aaPredicted RBP10.58□□□□□ -0.72
NEK1-201ENST00000439128 GHITMQ9H3K2 345 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 DCTN6O00399 190 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 H2AFB1P0C5Y9 115 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 CBR1P16152 277 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 ORM2P19652 201 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 GABRA6Q16445 453 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 OR5A2Q8NGI9 324 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 PFDN5Q99471 154 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 CNTD2Q9H8S5 307 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.58□□□□□ -0.72
NEK1-201ENST00000439128 B9A039 149 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 XRCC3O43542 346 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 FOXH1O75593 365 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 EPXP11678 715 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 TIAL1Q01085 375 aaKnown RBP eCLIP10.58□□□□□ -0.72
NEK1-201ENST00000439128 ACSF3Q4G176 576 aaPredicted RBP10.58□□□□□ -0.72
NEK1-201ENST00000439128 MSRB3Q8IXL7 192 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 GATA6Q92908 595 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 BOLA2-SMG1P6H3BVE0 249 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.72
NEK1-201ENST00000439128 ARF6P62330 175 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 ZNF767PQ75MW2 155 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 HARBI1Q96MB7 349 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 AUNIPQ9H7T9 357 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 STARD10Q9Y365 291 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 IGHV1-69-2A0A0G2JMI3 117 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 PYCARD-AS1I3L0S3 204 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 IFNL4K9M1U5 179 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 PSG4Q00888 419 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 ZNF418Q8TF45 676 aaPredicted RBP10.58□□□□□ -0.72
NEK1-201ENST00000439128 SIRT7Q9NRC8 400 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 SIRT5Q9NXA8 310 aa10.58□□□□□ -0.72
NEK1-201ENST00000439128 OR2J3O76001 311 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 ZFPL1O95159 310 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 DUS4LO95620 317 aaKnown RBP10.57□□□□□ -0.72
NEK1-201ENST00000439128 TGFAP01135 160 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 MBP02144 154 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 APOBEC3AP31941 199 aaPredicted RBP10.57□□□□□ -0.72
NEK1-201ENST00000439128 TFPI2P48307 235 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 OR1B1Q8NGR6 318 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 TRAV1-2A0A0B4J238 106 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 TRAV39A0A0B4J263 110 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 C1orf196B1AJZ1 125 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 GEMIN2O14893 280 aaKnown RBP10.57□□□□□ -0.72
NEK1-201ENST00000439128 SLC31A2O15432 143 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 SLC25A4P12235 298 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 FCN2Q15485 313 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 ZNF488Q96MN9 340 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 E5RGE8 158 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 NUPL2O15504 423 aaKnown RBP10.57□□□□□ -0.72
NEK1-201ENST00000439128 EIF4EBP2Q13542 120 aaPredicted RBP10.57□□□□□ -0.72
NEK1-201ENST00000439128 PXDC1Q5TGL8 231 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 RNF141Q8WVD5 230 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 BCL2L2Q92843 193 aaPredicted RBP10.57□□□□□ -0.72
NEK1-201ENST00000439128 RANGRFQ9HD47 186 aaPredicted RBP10.57□□□□□ -0.72
NEK1-201ENST00000439128 PITPNC1Q9UKF7 332 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 NSG2Q9Y328 171 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 MAGEB1P43366 347 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 LRRTM1Q86UE6 522 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 SKA3Q8IX90 412 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 OR10A7Q8NGE5 316 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 GNPNAT1Q96EK6 184 aaPredicted RBP10.57□□□□□ -0.72
NEK1-201ENST00000439128 PIPOXQ9P0Z9 390 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 ATPIF1Q9UII2 106 aa10.57□□□□□ -0.72
NEK1-201ENST00000439128 PPIAL4CA0A0B4J2A2 164 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 DBX1A6NMT0 343 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 ZNF716A6NP11 495 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 SYNGR3O43761 229 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 PPIAL4GP0DN37 164 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 GAMTQ14353 236 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 R3HDM4Q96D70 268 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 IGHV3-72A0A0B4J1Y9 119 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 IGLV3-19P01714 112 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 GNLYP22749 145 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 PLAC9Q5JTB6 97 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 HIST2H3AQ71DI3 136 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 DYNC2LI1Q8TCX1 351 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 LHX4Q969G2 390 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 GPR137Q96N19 417 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 CNN1P51911 297 aaKnown RBP10.56□□□□□ -0.72
NEK1-201ENST00000439128 OR10AC1Q8NH08 325 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms