RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 LIMK1P53667 647 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 AMER3Q8N944 861 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 DUSP13Q9UII6 198 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 LOC102724200A0A096LPH7 203 aaPredicted RBP13.3□□□□□ -0.28
TSC2-206ENST00000439117 CXCL13O43927 109 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 EIF3GO75821 320 aaKnown RBP eCLIP13.3□□□□□ -0.28
TSC2-206ENST00000439117 NKX2-2O95096 273 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 KCNE4Q8WWG9 221 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 SLC25A22Q9H936 323 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 SEC16AO15027 2179 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 LOC105371267A0A1B0GV96 52 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 MKRN2OSH3BPM6 223 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 DHHO43323 396 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 SPINK4O60575 86 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 HPP00738 406 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 MUC1P15941 1255 aaPredicted RBP13.3□□□□□ -0.28
TSC2-206ENST00000439117 LIAT1Q6ZQX7 453 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 PRRG2O14669 202 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 CBR3O75828 277 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 RHOBP62745 196 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 FAAP24Q9BTP7 215 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 TMEM147Q9BVK8 224 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 TREM2Q9NZC2 230 aa13.3□□□□□ -0.28
TSC2-206ENST00000439117 FER1L6Q2WGJ9 1857 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 M0R296 226 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
TSC2-206ENST00000439117 TMEM11P17152 192 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 HAAOP46952 286 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 PRSS41Q7RTY9 318 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 REC114Q7Z4M0 266 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 FBXO17Q96EF6 278 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 KIAA1456Q9P272 454 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 SEMA7AO75326 666 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 CYC1P08574 325 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 CDX1P47902 265 aaPredicted RBP13.29□□□□□ -0.28
TSC2-206ENST00000439117 BLNKQ8WV28 456 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 COLQQ9Y215 455 aaPredicted RBP13.29□□□□□ -0.28
TSC2-206ENST00000439117 FAM87AP0C7U9 286 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 SRSF5Q13243 272 aaKnown RBP13.29□□□□□ -0.28
TSC2-206ENST00000439117 OR8G1Q15617 311 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 OTPQ5XKR4 325 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 TMEM91Q6ZNR0 172 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 GVQW1Q8N7I0 195 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 OR2I1PQ8NGU4 316 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 VN1R17PQ8TDU5 208 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 DEDDO75618 318 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 EPPINO95925 133 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 GALMQ96C23 342 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 ATG101Q9BSB4 218 aa13.29□□□□□ -0.28
TSC2-206ENST00000439117 HOXD4P09016 255 aaPredicted RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 PGA4P0DJD7 388 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 PGA5P0DJD9 388 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 HTR1DP28221 377 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 SUCLG1P53597 346 aaKnown RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 POLR2GP62487 172 aaKnown RBP eCLIP13.28□□□□□ -0.28
TSC2-206ENST00000439117 THSD4Q6ZMP0 1018 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 BARX1Q9HBU1 254 aaPredicted RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 HDGFL3Q9Y3E1 203 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 CASP8AP2Q9UKL3 1982 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 COL11A1P12107 1806 aaPredicted RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 CRYM-AS1A6NIL9 109 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 CFDP00746 253 aaPredicted RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 GAPDHP04406 335 aaKnown RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 ZNF770Q6IQ21 691 aaPredicted RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 LDLRAD3Q86YD5 345 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 CLDN23Q96B33 292 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 ZNF391Q9UJN7 358 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 A0A1W2PQF6 199 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 CDC14BO60729 498 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 HOXB3P14651 431 aaPredicted RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 NHLRC3Q5JS37 347 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 ZNF880Q6PDB4 577 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 ZNF600Q6ZNG1 722 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 ARR3P36575 388 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 OR8B8Q15620 311 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 C17orf78Q8N4C9 275 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 CNTD2Q9H8S5 307 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 LANCL2Q9NS86 450 aa13.28□□□□□ -0.28
TSC2-206ENST00000439117 RALYQ9UKM9 306 aaKnown RBP13.28□□□□□ -0.28
TSC2-206ENST00000439117 FOCADQ5VW36 1801 aa13.27□□□□□ -0.28
TSC2-206ENST00000439117 IL2RAP01589 272 aa13.27□□□□□ -0.28
TSC2-206ENST00000439117 FGF2P09038 288 aa13.27□□□□□ -0.28
TSC2-206ENST00000439117 DYNLT3P51808 116 aa13.27□□□□□ -0.28
TSC2-206ENST00000439117 PPP1CAP62136 330 aa13.27□□□□□ -0.28
TSC2-206ENST00000439117 FOXF1Q12946 379 aa13.27□□□□□ -0.28
TSC2-206ENST00000439117 BCL2L2Q92843 193 aaPredicted RBP13.27□□□□□ -0.28
TSC2-206ENST00000439117 FAM60AQ9NP50 221 aa13.27□□□□□ -0.28
TSC2-206ENST00000439117 DIRC3C9JPN6 131 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 CDS2O95674 445 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 VDAC1P21796 283 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 ZNF343Q6P1L6 599 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 ROBO4Q8WZ75 1007 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 METTL1Q9UBP6 276 aaKnown RBP13.27□□□□□ -0.29
TSC2-206ENST00000439117 CACNG5Q9UF02 275 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 WASHC3Q9Y3C0 194 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 SPRY1O43609 319 aaPredicted RBP13.27□□□□□ -0.29
TSC2-206ENST00000439117 CNIH1O95406 144 aa13.27□□□□□ -0.29
TSC2-206ENST00000439117 MRPS24Q96EL2 167 aaKnown RBP13.27□□□□□ -0.29
TSC2-206ENST00000439117 SPOCK3Q9BQ16 436 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms