RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SLC25A24Q6NUK1 477 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 CMTM1Q8IZ96 169 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 PLPP5Q8NEB5 264 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 RHBDD1Q8TEB9 315 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 RLN3Q8WXF3 142 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 CABLES2Q9BTV7 478 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 RSG1Q9BU20 258 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 BCAT2O15382 392 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-204ENST00000438964 IGKV3-11P04433 115 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 MTCP1P56278 107 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 SPCS3P61009 180 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 MYBPHQ13203 477 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 TMEM37Q8WXS4 190 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 AURKAIP1Q9NWT8 199 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-204ENST00000438964 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
ACTN1-204ENST00000438964 FER1L5A0AVI2 2057 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 A8MWP6 167 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 C9J4A7 227 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 PROB1E7EW31 1015 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 IL18BPO95998 194 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 BMP5P22003 454 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 DUSP1P28562 367 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 HLA-DRB3P79483 266 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 COL10A1Q03692 680 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 TMEM267Q0VDI3 215 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-204ENST00000438964 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 THNSL2Q86YJ6 484 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 DDA1Q9BW61 102 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 GPR87Q9BY21 358 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 ZNF160Q9HCG1 818 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 LRFN1Q9P244 771 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 B3GAT1Q9P2W7 334 aa11.64□□□□□ -0.55
ACTN1-204ENST00000438964 PATE4P0C8F1 98 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 LMO1P25800 156 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 DEGS2Q6QHC5 323 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 C1orf87Q8N0U7 546 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 OR4X1Q8NH49 305 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 ELOVL1Q9BW60 279 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 ADAM20O43506 726 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 GUSBP08236 651 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 ZNF25P17030 456 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-204ENST00000438964 CLN3Q13286 438 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 ADIRFQ15847 76 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 MSI2Q96DH6 328 aaKnown RBP11.63□□□□□ -0.55
ACTN1-204ENST00000438964 LAMP3Q9UQV4 416 aa11.63□□□□□ -0.55
ACTN1-204ENST00000438964 THEGLP0DJG4 465 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 AADACP22760 399 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 AKT2P31751 481 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 GPR157Q5UAW9 335 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 SSX7Q7RTT5 188 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 MRPL37Q9BZE1 423 aaKnown RBP11.62□□□□□ -0.55
ACTN1-204ENST00000438964 P4HTMQ9NXG6 502 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 COPS7AQ9UBW8 275 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 NKX2-1P43699 371 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-204ENST00000438964 BATFQ16520 125 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 SNAI3Q3KNW1 292 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 UEVLDQ8IX04 471 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 FAM89BQ8N5H3 189 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 TMEM252Q8N6L7 170 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 CLDND2Q8NHS1 167 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 NEU1Q99519 415 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 NKX2-4Q9H2Z4 354 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 BCO1Q9HAY6 547 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 CUTCQ9NTM9 273 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 IL17BQ9UHF5 180 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 CACNA1DQ01668 2161 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 TCRBV21S2A2A0A5A6 115 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 XKRY2A2RUG3 117 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 MAS1LP35410 378 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 VAMP2P63027 116 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 RBM14Q96PK6 669 aaKnown RBP11.62□□□□□ -0.55
ACTN1-204ENST00000438964 SNHG12Q9BXW3 62 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 KLRF1Q9NZS2 232 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 UBE2J1Q9Y385 318 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-204ENST00000438964 EML6Q6ZMW3 1958 aa11.62□□□□□ -0.55
ACTN1-204ENST00000438964 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 WNT5AP41221 380 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 ELLP55199 621 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-204ENST00000438964 LFNGQ8NES3 379 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 PNRC2Q9NPJ4 139 aaKnown RBP11.61□□□□□ -0.55
ACTN1-204ENST00000438964 KIAA1456Q9P272 454 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 FBLN5Q9UBX5 448 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 FOXI3A8MTJ6 420 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-204ENST00000438964 CEBPZOSA8MTT3 80 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 IGHMP01871 453 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 RPS16P62249 146 aaKnown RBP11.61□□□□□ -0.55
ACTN1-204ENST00000438964 PMS2P11Q13670 270 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 Q6ZPA2 131 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 DOK3Q7L591 496 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
ACTN1-204ENST00000438964 ZNF837Q96EG3 531 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-204ENST00000438964 TMEM68Q96MH6 324 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 SIRT7Q9NRC8 400 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 NECAP2Q9NVZ3 263 aa11.61□□□□□ -0.55
ACTN1-204ENST00000438964 A0A1W2PPQ1 181 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 LINC01565O15544 149 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 DEFA4P12838 97 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms