RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NOVA1P51513 510 aaKnown RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 PRDX4Q13162 271 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 HLA-BQ31612 363 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 OR2B11Q5JQS5 317 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 LY6G6FQ5SQ64 297 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 NCR3LG1Q68D85 454 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 CLEC18CQ8NCF0 446 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 OR10D3Q8NH80 312 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 PINX1Q96BK5 328 aaKnown RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF385AQ96PM9 386 aaKnown RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SF3B5Q9BWJ5 86 aaKnown RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SAMD10Q9BYL1 202 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 CLEC1BQ9P126 229 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 ERRFI1Q9UJM3 462 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 TRPM7Q96QT4 1865 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 CLDN34H7C241 214 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 FOSL2P15408 326 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 IGFBP3P17936 291 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 KITLGP21583 273 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 PTGER4P35408 488 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 GNG3P63215 75 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 EWSR1Q01844 656 aaKnown RBP eCLIP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SSX2Q16385 188 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 GLRX5Q86SX6 157 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 TDHQ8IZJ6 230 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF808Q8N4W9 903 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 NECAP1Q8NC96 275 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SMRP1Q8NCR6 262 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 OR8U1Q8NH10 309 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 OR4F5Q8NH21 305 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 OR4A16Q8NH70 328 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 ADAMTS17Q8TE56 1095 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 CLDN23Q96B33 292 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 OR4F4Q96R69 305 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 COLQQ9Y215 455 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 LIPGQ9Y5X9 500 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 ASXL3Q9C0F0 2248 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 TPRP12270 2363 aaKnown RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1B0GTI1 187 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1W2PNV4 684 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1W2PPE2 198 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 SPINT2O43291 252 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 DEDDO75618 318 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 SCAF4O95104 1147 aaKnown RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 MBP02144 154 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 CST2P09228 141 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 ACKR3P25106 362 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 LPAR6P43657 344 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 IL24Q13007 206 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 PIGYQ3MUY2 71 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 TMEM211Q6ICI0 200 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 TBC1D26Q86UD7 250 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 OR10D4PQ8NGN7 298 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 ACTR3CQ9C0K3 210 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 HIPK2Q9H2X6 1198 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 OPA3Q9H6K4 179 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 RCC2Q9P258 522 aaKnown RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 ANAPC1Q9H1A4 1944 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 LOC101059948A0A1B0GTJ6 334 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 MASP2O00187 686 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 TRAF3IP2O43734 574 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 PDGFBP01127 241 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 HKR1P10072 659 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 CCL3P10147 92 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 IRF2P14316 349 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 COX5AP20674 150 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 OR8G1Q15617 311 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 SHISA5Q8N114 240 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 FER1L6-AS2Q96M78 137 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 UHRF2Q96PU4 802 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 CHRNA10Q9GZZ6 450 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 PATZ1Q9HBE1 687 aaKnown RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 LAMP3Q9UQV4 416 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 THSD7BQ9C0I4 1608 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 MED12Q93074 2177 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 IGKV3D-11A0A0A0MRZ8 115 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 NKX2-6A6NCS4 301 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 LINC01387J3KSC0 135 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 DNASE2O00115 360 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 FCGR3AP08637 254 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 DYNLT3P51808 116 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 TMEM267Q0VDI3 215 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 ENDOGQ14249 297 aaKnown RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 OR8B8Q15620 311 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF528Q3MIS6 628 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 FNDC7Q5VTL7 733 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 UBAC2Q8NBM4 344 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 DYRK2Q92630 601 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 ADGRG7Q96K78 797 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 LURAP1Q96LR2 239 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 OR51I2Q9H344 312 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 KCNIP2Q9NS61 270 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 SERTAD4Q9NUC0 356 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 SCN8AQ9UQD0 1980 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 IGKV1D-43A0A0B4J1Z2 117 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1W2PPQ1 181 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 MSGN1A6NI15 193 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 CHST1O43916 411 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 CD200P41217 278 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 HLA-DRB3P79483 266 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms