RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 F8VWA3 439 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 CCSO14618 274 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 SYNGR1O43759 233 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 RPS2P15880 293 aaKnown RBP21.97■■□□□ 1.11
CPNE1-216ENST00000437340 TUBG1P23258 451 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 UNQ6126/PRO20091Q6UXV3 157 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 SEM1Q6ZVN7 128 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 SPACA1Q9HBV2 294 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 RAB18Q9NP72 206 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 TUBG2Q9NRH3 451 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 NOS1APO75052 506 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-216ENST00000437340 WDR1O75083 606 aa21.96■■□□□ 1.11
CPNE1-216ENST00000437340 PI3P19957 117 aa21.96■■□□□ 1.11
CPNE1-216ENST00000437340 IL13RA2Q14627 380 aa21.96■■□□□ 1.11
CPNE1-216ENST00000437340 TSC22D1Q15714 1073 aa21.96■■□□□ 1.11
CPNE1-216ENST00000437340 FAM76BQ5HYJ3 339 aa21.96■■□□□ 1.11
CPNE1-216ENST00000437340 TMUB2Q71RG4 321 aa21.96■■□□□ 1.11
CPNE1-216ENST00000437340 ZNF71Q9NQZ8 489 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-216ENST00000437340 TP53TG5Q9Y2B4 290 aa21.96■■□□□ 1.11
CPNE1-216ENST00000437340 IQCF6A8MYZ5 107 aa21.95■■□□□ 1.1
CPNE1-216ENST00000437340 J3QT63 122 aa21.95■■□□□ 1.1
CPNE1-216ENST00000437340 CYCSP99999 105 aaKnown RBP21.95■■□□□ 1.1
CPNE1-216ENST00000437340 SLC22A25Q6T423 547 aa21.95■■□□□ 1.1
CPNE1-216ENST00000437340 BEND4Q6ZU67 534 aa21.95■■□□□ 1.1
CPNE1-216ENST00000437340 BATF2Q8N1L9 274 aa21.95■■□□□ 1.1
CPNE1-216ENST00000437340 ZNF610Q8N9Z0 462 aa21.95■■□□□ 1.1
CPNE1-216ENST00000437340 SLC25A40Q8TBP6 338 aa21.95■■□□□ 1.1
CPNE1-216ENST00000437340 MAB21L2Q9Y586 359 aa21.95■■□□□ 1.1
CPNE1-216ENST00000437340 BOD1L1Q8NFC6 3051 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 EXOSC2Q13868 293 aaKnown RBP21.94■■□□□ 1.1
CPNE1-216ENST00000437340 C11orf87Q6NUJ2 197 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 UNQ6494/PRO21346Q6UXR6 183 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 GSG1LQ6UXU4 331 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 CXorf67Q86X51 503 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-216ENST00000437340 OR1J1Q8NGS3 322 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 PPP1R1CQ8WVI7 109 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 GTF3AQ92664 365 aaKnown RBP21.94■■□□□ 1.1
CPNE1-216ENST00000437340 HS3ST6Q96QI5 342 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 NMES1Q9C002 83 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 MFFQ9GZY8 342 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 UBQLN2Q9UHD9 624 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 ATMQ13315 3056 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 BSNQ9UPA5 3926 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 FAM221AA4D161 298 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 LRP5LA4QPB2 252 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 FAM25EA8MYX2 175 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 GLAP06280 429 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 CALCRP30988 508 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 SLC9A3R2Q15599 337 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 PLEKHN1Q494U1 663 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-216ENST00000437340 KRTCAP3Q53RY4 240 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 FAM169BQ8N8A8 192 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 SEC22AQ96IW7 307 aa21.94■■□□□ 1.1
CPNE1-216ENST00000437340 NAPSAO96009 420 aa21.93■■□□□ 1.1
CPNE1-216ENST00000437340 PRKACAP17612 351 aa21.93■■□□□ 1.1
CPNE1-216ENST00000437340 ZNF546Q86UE3 836 aa21.93■■□□□ 1.1
CPNE1-216ENST00000437340 MARS2Q96GW9 593 aaKnown RBP21.93■■□□□ 1.1
CPNE1-216ENST00000437340 CCDC120Q96HB5 630 aa21.93■■□□□ 1.1
CPNE1-216ENST00000437340 ARL6Q9H0F7 186 aa21.93■■□□□ 1.1
CPNE1-216ENST00000437340 ERVH48-1M5A8F1 160 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 IGLV1-44P01699 117 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 SERPINF1P36955 418 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 ERVS71-1P61550 626 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 FAM58AQ8N1B3 248 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 OPN3Q9H1Y3 402 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-216ENST00000437340 LIME1Q9H400 295 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 RIMS4Q9H426 269 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-216ENST00000437340 IFT22Q9H7X7 185 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 CHMP1AQ9HD42 196 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-216ENST00000437340 AMDHD2Q9Y303 409 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 MED19A0JLT2 244 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-216ENST00000437340 C5orf51A6NDU8 294 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 RP2O75695 350 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 KNG1P01042 644 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 GLP1RP43220 463 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 PSG7Q13046 419 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 ANKRD55Q3KP44 614 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 C1orf185Q5T7R7 199 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 C3P1Q6ZMU1 363 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 Q6ZPA2 131 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 BHLHA15Q7RTS1 189 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-216ENST00000437340 SGPP2Q8IWX5 399 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 Q8IYB0 196 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 ZCCHC14Q8WYQ9 949 aaKnown RBP21.92■■□□□ 1.1
CPNE1-216ENST00000437340 WDR13Q9H1Z4 485 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 LUZP4Q9P127 313 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 POLDIP2Q9Y2S7 368 aa21.92■■□□□ 1.1
CPNE1-216ENST00000437340 CHD8Q9HCK8 2581 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 A0A0D9SG52 128 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 AGFG2O95081 481 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 IFNA2P01563 188 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 ZNF728P0DKX0 622 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 UCP3P55916 312 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 ZNF345Q14585 488 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 C1orf174Q8IYL3 243 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 OR8H3Q8N146 312 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 KLF14Q8TD94 323 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-216ENST00000437340 IL36RNQ9UBH0 155 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 FAM215AQ9Y5M1 114 aa21.91■■□□□ 1.1
CPNE1-216ENST00000437340 CRYM-AS1A6NIL9 109 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms