RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 HERV-K104P61576 105 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 PMS2P11Q13670 270 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 MSI2Q96DH6 328 aaKnown RBP10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 NOL4LQ96MY1 436 aaPredicted RBP10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF665Q9H7R5 613 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 PLEKHF2Q9H8W4 249 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 GLRX2Q9NS18 164 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 DOCK8Q8NF50 2099 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 FAM221BA6H8Z2 402 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 MKRN2OSH3BPM6 223 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 IFNL4K9M1U5 179 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 DVL1O14640 695 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 TSPAN2O60636 221 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 GFERP55789 205 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 P2RY6Q15077 328 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF506Q5JVG8 444 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 UEVLDQ8IX04 471 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 OR5T1Q8NG75 326 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 OR10A7Q8NGE5 316 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 OR1P1Q8NH06 330 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 C18orf12Q96KH6 178 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 SNHG12Q9BXW3 62 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 IGFLR1Q9H665 355 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 SDK1Q7Z5N4 2213 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 PROB1E7EW31 1015 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 SEMA4FO95754 770 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 KIR2DL1P43626 348 aaPredicted RBP10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 VSTM2BA6NLU5 285 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 CEBPZOSA8MTT3 80 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 MSTNO14793 375 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 MYOGP15173 224 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 GNRHRP30968 328 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 GUCA1AP43080 201 aaPredicted RBP10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 FOXF1Q12946 379 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 FAM185AQ8N0U4 392 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 MOB1AQ9H8S9 216 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 LANCL2Q9NS86 450 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 MYO9BQ13459 2157 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 KIR2DS5A0A0G2JLQ3 304 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 A0A0G2JNG1 304 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 KIR2DS3K7RE56 304 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 ADAM20O43506 726 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 CYB5R3P00387 301 aaPredicted RBP10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 IGKV3-11P04433 115 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 RPL29P47914 159 aaKnown RBP10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 KIR2DS5Q14953 304 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 THEM4Q5T1C6 240 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 NAT6Q93015 286 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 DDIT4LQ96D03 193 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
HMGCS1-202ENST00000433297 OR2J2O76002 312 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 IGHG1P01857 330 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 AKT2P31751 481 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 SLC22A18ASQ8N1D0 253 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 TPSD1Q9BZJ3 242 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 IGHV5-51A0A0C4DH38 117 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 C3orf85A0A1B0GTC6 90 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 A0A1W2PPQ1 181 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 TNFRSF10CO14798 259 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 AADACP22760 399 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 PAX5Q02548 391 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 BATFQ16520 125 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF705AQ6ZN79 300 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 DTX1Q86Y01 620 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 RSG1Q9BU20 258 aa10.04□□□□□ -0.8
HMGCS1-202ENST00000433297 A0A1B0GU03 582 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 A0A1W2PQF6 199 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 BLACEA4D250 179 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 A6NNC1 897 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 CHST1O43916 411 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 IL18BPO95998 194 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 HBE1P02100 147 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 SFTPCP11686 197 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 MYBPHQ13203 477 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 SMAD4Q13485 552 aaKnown RBP10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 PIGYQ3MUY2 71 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF787Q6DD87 383 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 IL22RA1Q8N6P7 574 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 OR4D5Q8NGN0 318 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 GNPNAT1Q96EK6 184 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 MMACHCQ9Y4U1 282 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 MUC22E2RYF6 1773 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 FOXI3A8MTJ6 420 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 B4DEV8 164 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 HMGB3O15347 200 aaKnown RBP10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 PITX3O75364 302 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 RPS18P62269 152 aaKnown RBP10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 FAM90A2PQ658T7 463 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 SLC16A14Q7RTX9 510 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 OR2AE1Q8NHA4 323 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 METTL9Q9H1A3 318 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 A0A1W2PQD3 144 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 PPP5D1E7EU14 171 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 M0R143 59 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 RRP8O43159 456 aaKnown RBP10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 PCP4P48539 62 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 COL13A1Q5TAT6 717 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 NCR3LG1Q68D85 454 aa10.03□□□□□ -0.8
HMGCS1-202ENST00000433297 RPUSD4Q96CM3 377 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms