RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RSRP1Q9BUV0 290 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF471Q9BX82 626 aaPredicted RBP11.94□□□□□ -0.5
HOXC4-202ENST00000430889 NAA60Q9H7X0 242 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 DNAJB11Q9UBS4 358 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 LHX6Q9UPM6 363 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 CACNA1GO43497 2377 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 OR5B21A6NL26 309 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 CEACAM4O75871 244 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF205O95201 554 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 HOXB5P09067 269 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 IGHV1-2P23083 117 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 FCGR2CP31995 323 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 CCL11P51671 97 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 PIGPP57054 158 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 LINC00596Q86U02 117 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 BATF2Q8N1L9 274 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 BVESQ8NE79 360 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 SHARPINQ9H0F6 387 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF442Q9H7R0 627 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 METTL8Q9H825 291 aaKnown RBP11.94□□□□□ -0.5
HOXC4-202ENST00000430889 Q9N2K0 584 aa11.94□□□□□ -0.5
HOXC4-202ENST00000430889 AQP7O14520 342 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 CRYZL1O95825 349 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 KCNJ3P48549 501 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 IL24Q13007 206 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 SLC38A6Q8IZM9 456 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 OR5L1Q8NGL2 311 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 LRRC20Q8TCA0 184 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 GTF3AQ92664 365 aaKnown RBP11.93□□□□□ -0.5
HOXC4-202ENST00000430889 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
HOXC4-202ENST00000430889 PKIBQ9C010 78 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 DNTTIP1Q9H147 329 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 OR51I2Q9H344 312 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 NARFLQ9H6Q4 476 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 IFT22Q9H7X7 185 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 SLC2A9Q9NRM0 540 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
HOXC4-202ENST00000430889 TRBV6-6A0A0A6YYG2 114 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 ANKRD30BLA7E2S9 258 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
HOXC4-202ENST00000430889 TRAPPC2LH3BP13 241 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 FGF16O43320 207 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 AADACP22760 399 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 GNG3P63215 75 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 SNTB1Q13884 538 aaKnown RBP11.92□□□□□ -0.5
HOXC4-202ENST00000430889 IL13RA2Q14627 380 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 PAN3Q58A45 887 aaKnown RBP11.92□□□□□ -0.5
HOXC4-202ENST00000430889 GGNBP1Q5YKI7 109 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 RTN4IP1Q8WWV3 396 aaPredicted RBP11.92□□□□□ -0.5
HOXC4-202ENST00000430889 TOMM40LQ969M1 308 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 MSI2Q96DH6 328 aaKnown RBP11.92□□□□□ -0.5
HOXC4-202ENST00000430889 C18orf12Q96KH6 178 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 CNTNAP3BQ96NU0 1288 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 SUCNR1Q9BXA5 334 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 CNTNAP3Q9BZ76 1288 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 NUP50Q9UKX7 468 aa11.92□□□□□ -0.5
HOXC4-202ENST00000430889 TRAV17A0A0B4J275 112 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 SMPD2O60906 423 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 CNOT4O95628 575 aaKnown RBP11.91□□□□□ -0.5
HOXC4-202ENST00000430889 CELA3BP08861 270 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 OR5AC1P0C628 307 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 PET100P0DJ07 73 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 GABRA6Q16445 453 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 TBC1D28Q2M2D7 210 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 IGSF11Q5DX21 431 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 FAM76BQ5HYJ3 339 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 C1QTNF12Q5T7M4 302 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF880Q6PDB4 577 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 FAM214BQ7L5A3 538 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF573Q86YE8 665 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 CCDC36Q8IYA8 594 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 PLK3Q9H4B4 646 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 TMEM100Q9NV29 134 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 MEMO1Q9Y316 297 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 FAM186AA6NE01 2351 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 H7C1Q1 480 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 TUSC2O75896 110 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 PPYP01298 95 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 GLAP06280 429 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 COX5AP20674 150 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 GLP1RP43220 463 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 RND3P61587 244 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 TCF15Q12870 199 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 HERPUD1Q15011 391 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 IAH1Q2TAA2 248 aaPredicted RBP11.91□□□□□ -0.5
HOXC4-202ENST00000430889 OR2T2Q6IF00 324 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 HAGHLQ6PII5 290 aaPredicted RBP11.91□□□□□ -0.5
HOXC4-202ENST00000430889 UNQ6126/PRO20091Q6UXV3 157 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 Q6ZT83 130 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 P4HA3Q7Z4N8 544 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 WDR86Q86TI4 376 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 GLYATL2Q8WU03 294 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 HIST1H2AAQ96QV6 131 aa11.91□□□□□ -0.5
HOXC4-202ENST00000430889 FAM86C1Q9NVL1 165 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms