RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 LHFPL3Q86UP9 236 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 ZNF676Q8N7Q3 588 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 OR51A2Q8NGJ7 313 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 OR2T6Q8NHC8 308 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 FOXRED1Q96CU9 486 aaPredicted RBP9.46□□□□□ -0.9
HDAC4-202ENST00000430200 PDCD1LG2Q9BQ51 273 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 ALG8Q9BVK2 526 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 NPFFR1Q9GZQ6 430 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 TMEM133Q9H2Q1 129 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 ZNF286AQ9HBT8 521 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 GSTK1Q9Y2Q3 226 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 SESN1Q9Y6P5 492 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.9
HDAC4-202ENST00000430200 A0A1W2PPH5 198 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 SH2D7A6NKC9 451 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-202ENST00000430200 HTR1AP08908 422 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 ZNF20P17024 532 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 CCR9P51686 369 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 GTF2A1P52655 376 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-202ENST00000430200 ATP1B3P54709 279 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 LGALS4P56470 323 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 MEF2CQ06413 473 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-202ENST00000430200 AESQ08117 197 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 ALKBH1Q13686 389 aaKnown RBP9.45□□□□□ -0.9
HDAC4-202ENST00000430200 ATXN7L3Q14CW9 347 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-202ENST00000430200 SMN1Q16637 294 aaKnown RBP9.45□□□□□ -0.9
HDAC4-202ENST00000430200 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 TMEM244Q5VVB8 128 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 LHFPL2Q6ZUX7 228 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 ACBD7Q8N6N7 88 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 CCDC54Q8NEL0 328 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 OR13C3Q8NGS6 347 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 OR13D1Q8NGV5 346 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 TRUB1Q8WWH5 349 aaKnown RBP9.45□□□□□ -0.9
HDAC4-202ENST00000430200 SPSB1Q96BD6 273 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 C10orf35Q96D05 121 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 OR5M11Q96RB7 305 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 ADI1Q9BV57 179 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 WNT10AQ9GZT5 417 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 COMMD4Q9H0A8 199 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 SEBOXQ9HB31 216 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-202ENST00000430200 HHLA2Q9UM44 414 aa9.45□□□□□ -0.9
HDAC4-202ENST00000430200 hADV38S2A0JD32 116 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 FAM90A22PA8MWA6 464 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 SLC33A1O00400 549 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-202ENST00000430200 MGST3O14880 152 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 WBP4O75554 376 aaKnown RBP9.44□□□□□ -0.9
HDAC4-202ENST00000430200 IGLV1-47P01700 117 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 MT-ND2P03891 347 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 OPN1MWP04001 364 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 LIMS3P0CW19 117 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 LIMS4P0CW20 117 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 OPN1MW2P0DN77 364 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 OPN1MW3P0DN78 364 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 GALEQ14376 348 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 TCTEX1D4Q5JR98 221 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 SPIN3Q5JUX0 258 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-202ENST00000430200 C10orf99Q6UWK7 81 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 Q6ZTK2 550 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 Q8IYB0 196 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 OR52I1Q8NGK6 324 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 RPS4Y2Q8TD47 263 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 ORAI1Q96D31 301 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 MALSU1Q96EH3 234 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-202ENST00000430200 CLEC7AQ9BXN2 247 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 MMP28Q9H239 520 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 ERVK13-1Q9NX77 482 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 ING3Q9NXR8 418 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 GMPPBQ9Y5P6 360 aa9.44□□□□□ -0.9
HDAC4-202ENST00000430200 SIRT4Q9Y6E7 314 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-202ENST00000430200 A0A0G2JK05 382 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 hCG_1809904A0A1W2PP81 198 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 A0A1W2PPE2 198 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 A0A1W2PR64 198 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 A0A1W2PRV1 198 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 GABRPO00591 440 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 HSPB6O14558 160 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 LALBAP00709 142 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 AMY1AP04745 511 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 AMY2AP04746 511 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 PRKACBP22694 351 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 CDK2P24941 298 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 PEX2P28328 305 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 DYNLT3P51808 116 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 SLC34A1Q06495 639 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 ZSCAN26Q16670 478 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 C17orf58Q2M2W7 97 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 NSUN5P1Q3KNT7 163 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 MEDAGQ5VYS4 303 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 ZNF529Q6P280 563 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 TRAPPC6BQ86SZ2 158 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 OR13C5Q8NGS8 318 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 RHOXF1Q8NHV9 184 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 NDNFQ8TB73 568 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 RAB18Q9NP72 206 aa9.43□□□□□ -0.9
HDAC4-202ENST00000430200 EXOSC4Q9NPD3 245 aaKnown RBP9.43□□□□□ -0.9
HDAC4-202ENST00000430200 TRAV24A0A0B4J272 114 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms