RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 M0R233 179 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 WWP2O00308 870 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CHST10O43529 356 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 TPST1O60507 370 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 AQP8O94778 261 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 ATG12O94817 140 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CD160O95971 181 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 HPP00738 406 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CSTAP01040 98 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 SERPINE1P05121 402 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CD55P08174 381 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CSF3P09919 207 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CT45A10P0DMU9 189 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 PPIAL4FP0DN26 164 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 FOLR1P15328 257 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 GTF2E2P29084 291 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 SDC4P31431 198 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 OTX1P32242 354 aaPredicted RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 TGFBR2P37173 567 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 KCNJ3P48549 501 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 GSK3BP49841 420 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 IDH3GP51553 393 aaPredicted RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 SNRPD2P62316 118 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 MS4A2Q01362 244 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 ANK2Q01484 3957 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 DPYSL3Q14195 570 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 MPPED2Q15777 294 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 NKAIN1Q4KMZ8 207 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 COQ5Q5HYK3 327 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 ZNF506Q5JVG8 444 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 C10orf91Q5T1B1 145 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 TMEM236Q5W0B7 351 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 FAM45BPQ6NSW5 357 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 TMEM107Q6UX40 140 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 HSDL2Q6YN16 418 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 ZNF571Q7Z3V5 609 aaPredicted RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 SERPINA9Q86WD7 417 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 NR2C2APQ86WQ0 139 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 ANGPTL5Q86XS5 388 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 PRSS58Q8IYP2 241 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 MS4A15Q8N5U1 240 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 ZNF283Q8N7M2 679 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CSNK1G2-AS1Q8NCQ2 148 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CCDC54Q8NEL0 328 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 OR9A2Q8NGT5 310 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 OR9A4Q8NGU2 314 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 OR2Y1Q8NGV0 311 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 OR5J2Q8NH18 312 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 FAM45AQ8TCE6 357 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 PIH1D2Q8WWB5 315 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 POP5Q969H6 163 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 RAB3CQ96E17 227 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CCDC126Q96EE4 140 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 MALSU1Q96EH3 234 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 MRPS24Q96EL2 167 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 POM121L2Q96KW2 1035 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 HCAR1Q9BXC0 346 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 NXF5Q9H1B4 397 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 OR52A5Q9H2C5 316 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 DUSP21Q9H596 190 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 KCNJ16Q9NPI9 418 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 SCRT2Q9NQ03 307 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 MEPEQ9NQ76 525 aaPredicted RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 SLC17A5Q9NRA2 495 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 C14orf105Q9NVL8 296 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 RBFOX1Q9NWB1 397 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 GPATCH2LQ9NWQ4 482 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 SIGLEC8Q9NYZ4 499 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 ONECUT1Q9UBC0 465 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 NXT1Q9UKK6 140 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 CARHSP1Q9Y2V2 147 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 MEMO1Q9Y316 297 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 STARD10Q9Y365 291 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 TPRKBQ9Y3C4 175 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 AK6Q9Y3D8 172 aaKnown RBP3.23□□□□□ -1.89
HMGB3-203ENST00000430118 PPIAL4AQ9Y536 164 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 DCHS2Q6V1P9 2916 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 IGHV5-51A0A0C4DH38 117 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 A0A1W2PP18 115 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 DHRS12A0PJE2 317 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 SLC5A10A0PJK1 596 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 LRP5LA4QPB2 252 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 TRAPPC13A5PLN9 417 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 BBIP1A8MTZ0 92 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 EPM2AB3EWF7 344 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 LRRN3E7EW58 273 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 SLC17A2O00624 439 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 HPGDSO60760 199 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 MPC2O95563 127 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 LGI1O95970 557 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CA1P00915 261 aaPredicted RBP3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CRYGCP07315 174 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CRYGBP07316 175 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CFC1BP0CG36 223 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CFC1P0CG37 223 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 HSD11B1P28845 292 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ARR3P36575 388 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CRYBB2P43320 205 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 MAGEA2P43356 314 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 OR1D4P47884 311 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms