RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 TGIF1Q15583 401 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 CARFQ8N187 725 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 SPEM1Q8N4L4 309 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 EDEM2Q9BV94 578 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 ZNHIT1O43257 154 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 SCGB1D1O95968 90 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 IL2RAP01589 272 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 RAC1P63000 192 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 SRSF3P84103 164 aaKnown RBP11.06□□□□□ -0.64
CPNE4-201ENST00000429747 CACNA1DQ01668 2161 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 EWSR1Q01844 656 aaKnown RBP eCLIP11.06□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF528Q3MIS6 628 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 ADAMTS17Q8TE56 1095 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF251Q9BRH9 671 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 TP53TG5Q9Y2B4 290 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 MPPED1O15442 326 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 RAMP1O60894 148 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 SEC11BP0C7V7 166 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 GABRA2P47869 451 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 P2RY1P47900 373 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 TBC1D26Q86UD7 250 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 SLC35G3Q8N808 338 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 DMBX1Q8NFW5 382 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 DUSP15Q9H1R2 295 aaPredicted RBP11.06□□□□□ -0.64
CPNE4-201ENST00000429747 UBE2ZQ9H832 354 aaPredicted RBP11.06□□□□□ -0.64
CPNE4-201ENST00000429747 GNG12Q9UBI6 72 aa11.06□□□□□ -0.64
CPNE4-201ENST00000429747 COL4A6Q14031 1691 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 BTBD17A6NE02 478 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 TRAF3IP2O43734 574 aaPredicted RBP11.05□□□□□ -0.64
CPNE4-201ENST00000429747 METTL15P1P0C7V9 234 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 FABP4P15090 132 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 DYNLT3P51808 116 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 C9orf152Q5JTZ5 239 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 FNDC7Q5VTL7 733 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 KCNIP4Q6PIL6 250 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 LAMP3Q9UQV4 416 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 A0A1W2PPQ1 181 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 MEX3AA1L020 520 aaKnown RBP11.05□□□□□ -0.64
CPNE4-201ENST00000429747 PHOX2AO14813 284 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 DEDDO75618 318 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 MBPP02686 304 aaPredicted RBP11.05□□□□□ -0.64
CPNE4-201ENST00000429747 CELA2AP08217 269 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 FOSL2P15408 326 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 OR10D3Q8NH80 312 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 OCIAD1Q9NX40 245 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 LHX6Q9UPM6 363 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 CHST1O43916 411 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 SMIM6P0DI80 62 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF708P17019 499 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 ATP6V0CP27449 155 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 FGF8P55075 233 aaPredicted RBP11.05□□□□□ -0.64
CPNE4-201ENST00000429747 TMEM50BP56557 158 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 UBE2V2Q15819 145 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 HLA-BQ31612 363 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 SLC25A47Q6Q0C1 308 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 OR4F5Q8NH21 305 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 OR4F4Q96R69 305 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 GPHA2Q96T91 129 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 ARV1Q9H2C2 271 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 PLEKHA3Q9HB20 300 aa11.05□□□□□ -0.64
CPNE4-201ENST00000429747 H0YIZ8 118 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF154Q13106 437 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 EDDM3AQ14507 147 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 KCNE4Q8WWG9 221 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 STARD10Q9Y365 291 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 DNAJC13O75165 2243 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 MELTFP08582 738 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 FCGR3AP08637 254 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 GCH1P30793 250 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 FAM3AP98173 230 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 PRDX4Q13162 271 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 ETV3LQ6ZN32 361 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 ZNF573Q86YE8 665 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 GAPTQ8N292 157 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 POC1AQ8NBT0 407 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 UFSP2Q9NUQ7 469 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 TANC1Q9C0D5 1861 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 CLEC18AA5D8T8 446 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 IGHEP01854 428 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 GAPDHP04406 335 aaKnown RBP11.04□□□□□ -0.64
CPNE4-201ENST00000429747 RUNX1Q01196 453 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 SSX2Q16385 188 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 TMEM41BQ5BJD5 291 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 CLEC18CQ8NCF0 446 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 SLC39A7Q92504 469 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 MESP1Q9BRJ9 268 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 RNF126Q9BV68 326 aa11.04□□□□□ -0.64
CPNE4-201ENST00000429747 PATZ1Q9HBE1 687 aaKnown RBP11.04□□□□□ -0.64
CPNE4-201ENST00000429747 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 CER1O95813 267 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 NCR3LG1Q68D85 454 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 WDR74Q6RFH5 385 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-201ENST00000429747 PAQR4Q8N4S7 273 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-201ENST00000429747 SMRP1Q8NCR6 262 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 HLA-CQ95604 372 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 ERGIC1Q969X5 290 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 HEYLQ9NQ87 328 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-201ENST00000429747 CCL28Q9NRJ3 127 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 SLC7A10Q9NS82 523 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 CACNG5Q9UF02 275 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms