RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	RAB40B	Q12829	278 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	SAMD5	Q5TGI4	173 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	C11orf88	Q6PI97	169 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	CCBE1	Q6UXH8	406 aa	Predicted RBP	14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	ZBTB49	Q6ZSB9	765 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	REC114	Q7Z4M0	266 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	PQLC1	Q8N2U9	271 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR4C13	Q8NGP0	309 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR13C9	Q8NGT0	318 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	RFT1	Q96AA3	541 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738		Q96MT0	163 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	SPACA5	Q96QH8	159 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	AMBN	Q9NP70	447 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	INPP5E	Q9NRR6	644 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	ERVK13-1	Q9NX77	482 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	TCF19	Q9Y242	345 aa		14.31	□□□□□ -0.12
MRPL28-203	ENST00000429738	PIN1P1	O15428	100 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	ZFPL1	O95159	310 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	FADS2	O95864	444 aa	Known RBP	14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	PRB2	P02812	416 aa	Predicted RBP	14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	CALCB	P10092	127 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	MRPL28	Q13084	256 aa	Known RBP	14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	HERPUD1	Q15011	391 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738		Q6ZTK2	550 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	SAXO1	Q8IYX7	474 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	PARP16	Q8N5Y8	322 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	ZNF676	Q8N7Q3	588 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	APH1B	Q8WW43	257 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	CFHR4	Q92496	578 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	NPFFR1	Q9GZQ6	430 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	ZCCHC4	Q9H5U6	513 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	RHOF	Q9HBH0	211 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	EXOSC4	Q9NPD3	245 aa	Known RBP	14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	FAM118A	Q9NWS6	357 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	GLS2	Q9UI32	602 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	GSTK1	Q9Y2Q3	226 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	UBE2J1	Q9Y385	318 aa	Predicted RBP	14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	SESN1	Q9Y6P5	492 aa		14.3	□□□□□ -0.12
MRPL28-203	ENST00000429738	IGHV2-26	A0A0B4J1V2	119 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	TMEM212	A6NML5	194 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738		E9PI62	339 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	MMP23A	O75900	390 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR2H2	O95918	312 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	RPSA	P08865	295 aa	Known RBP	14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	RAB13	P51153	203 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	DYNLT3	P51808	116 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	SNU13	P55769	128 aa	Known RBP	14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	P2RX3	P56373	397 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	ZP1	P60852	638 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	FAM189A2	Q15884	450 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	SSX2	Q16385	188 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	MINOS1	Q5TGZ0	78 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738		Q8N2B8	174 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR52I1	Q8NGK6	324 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR5D18	Q8NGL1	313 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	OR2T6	Q8NHC8	308 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	TMEM133	Q9H2Q1	129 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738	MINOS1-NBL1	R4GNA1	71 aa		14.29	□□□□□ -0.12
MRPL28-203	ENST00000429738		A6NDX4	124 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	SIRPB1	O00241	398 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	SH2D1B	O14796	132 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	CSN2	P05814	226 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	CCDC159	P0C7I6	412 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	OCM2	P0CE71	109 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	OCM	P0CE72	109 aa	Predicted RBP	14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	PLA1A	Q53H76	456 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738		Q6P435	159 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	SERPINA12	Q8IW75	414 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	DTX3	Q8N9I9	347 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	RPS4Y2	Q8TD47	263 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	CORO2A	Q92828	525 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	PDCD1LG2	Q9BQ51	273 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	JAM3	Q9BX67	310 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	ZNF702P	Q9H963	129 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	FOXJ3	Q9UPW0	622 aa		14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	RPL36	Q9Y3U8	105 aa	Known RBP	14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	KMT2C	Q8NEZ4	4911 aa	Known RBP	14.28	□□□□□ -0.12
MRPL28-203	ENST00000429738	SULT1B1	O43704	296 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	LIMS3	P0CW19	117 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	LIMS4	P0CW20	117 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	DYNC1I2	Q13409	638 aa	Known RBP	14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	KISS1	Q15726	138 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	LPCAT4	Q643R3	524 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	ZNF529	Q6P280	563 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	KLHDC1	Q8N7A1	406 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	OR5D14	Q8NGL3	314 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	OR4P4	Q8NGL7	312 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	OR5AK2	Q8NH90	309 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	HAVCR2	Q8TDQ0	301 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	CLEC7A	Q9BXN2	247 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	NEK6	Q9HC98	313 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	ABCB10	Q9NRK6	738 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	TAS2R3	Q9NYW6	316 aa		14.27	□□□□□ -0.13
MRPL28-203	ENST00000429738	EBAG9	O00559	213 aa		14.26	□□□□□ -0.13
MRPL28-203	ENST00000429738	WBP4	O75554	376 aa	Known RBP	14.26	□□□□□ -0.13
MRPL28-203	ENST00000429738	GBX2	P52951	348 aa	Predicted RBP	14.26	□□□□□ -0.13
MRPL28-203	ENST00000429738	IL18R1	Q13478	541 aa		14.26	□□□□□ -0.13
MRPL28-203	ENST00000429738	CDK5R1	Q15078	307 aa		14.26	□□□□□ -0.13
MRPL28-203	ENST00000429738	KLHL22	Q53GT1	634 aa		14.26	□□□□□ -0.13
MRPL28-203	ENST00000429738	HEPN1	Q6WQI6	88 aa		14.26	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms