RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZNF48Q96MX3 618 aaPredicted RBP7.49□□□□□ -1.21
SMC1A-203ENST00000428014 PCGF1Q9BSM1 259 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 MND1Q9BWT6 205 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 SLITRK2Q9H156 845 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 ESM1Q9NQ30 184 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 SNTG1Q9NSN8 517 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 ZNRD1Q9P1U0 126 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 CKLFQ9UBR5 152 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 BLOC1S6Q9UL45 172 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 TPRKBQ9Y3C4 175 aa7.49□□□□□ -1.21
SMC1A-203ENST00000428014 TBL2Q9Y4P3 447 aaKnown RBP7.49□□□□□ -1.21
SMC1A-203ENST00000428014 DNHD1Q96M86 4753 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 A0A087X0M5 115 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 TRBV5-7A0A0A0MS05 114 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 A0A1B0GX30 115 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 A0A1W2PQ09 198 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 DNAJC9-AS1A6NH13 148 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 MYL12BO14950 172 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 SC5DO75845 299 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 CLIC3O95833 236 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 HAND1O96004 215 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 GLAP06280 429 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 CDK1P06493 297 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 SFTPBP07988 381 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 GNAO1P09471 354 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 ZNF728P0DKX0 622 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 CD34P28906 385 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 IER3P46695 156 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 DLX6P56179 175 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 RPS11P62280 158 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMC1A-203ENST00000428014 PPP3R1P63098 170 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 COL10A1Q03692 680 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 BAMBIQ13145 260 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 IKZF1Q13422 519 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 DOC2BQ14184 412 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 SLC9A3R2Q15599 337 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 ODF4Q2M2E3 257 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 MPV17LQ2QL34 196 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 TMEM30BQ3MIR4 351 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 Q3ZCU0 254 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 MINOS1Q5TGZ0 78 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 TMEM200BQ69YZ2 307 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 OR52W1Q6IF63 320 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 C11orf88Q6PI97 169 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 GDPGP1Q6ZNW5 385 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 C17orf107Q6ZR85 190 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 SLC16A12Q6ZSM3 486 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 GDPD3Q7L5L3 318 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 RTN4RL2Q86UN3 420 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 STX19Q8N4C7 294 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 OR10A7Q8NGE5 316 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 OR13C9Q8NGT0 318 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 OR10AC1Q8NH08 325 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 TSEN15Q8WW01 171 aaKnown RBP7.48□□□□□ -1.21
SMC1A-203ENST00000428014 RGP1Q92546 391 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-203ENST00000428014 GHSRQ92847 366 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 EMG1Q92979 244 aaKnown RBP7.48□□□□□ -1.21
SMC1A-203ENST00000428014 CREB3L1Q96BA8 519 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 FOXRED1Q96CU9 486 aaPredicted RBP7.48□□□□□ -1.21
SMC1A-203ENST00000428014 UQCC2Q9BRT2 126 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 SPACA1Q9HBV2 294 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 RAB18Q9NP72 206 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 EXOSC4Q9NPD3 245 aaKnown RBP7.48□□□□□ -1.21
SMC1A-203ENST00000428014 AASSQ9UDR5 926 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 RAB26Q9ULW5 256 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 MINOS1-NBL1R4GNA1 71 aa7.48□□□□□ -1.21
SMC1A-203ENST00000428014 IGKV1-12A0A0C4DH73 117 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 A0A1B0GW55 424 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 RNASEK-C17orf49H0YIS7 233 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 NPFFO15130 113 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 CA11O75493 328 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 IGKV1D-12P01611 117 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 MELTFP08582 738 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 GALP22466 123 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 BDKRB2P30411 391 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 PTGFRP43088 359 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 P2RX3P56373 397 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 HOXA4Q00056 320 aaPredicted RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 HNRNPA0Q13151 305 aaKnown RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 IRF3Q14653 427 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DEFB112Q30KQ8 113 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 OR2G6Q5TZ20 316 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 ASPHD2Q6ICH7 369 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DUX4L9Q6RFH8 374 aaPredicted RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 UNQ9370/PRO34162Q6UXP9 181 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 HEPN1Q6WQI6 88 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 PRSS48Q7RTY5 328 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 ZNF554Q86TJ5 538 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 LYPD6Q86Y78 171 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 OR51A2Q8NGJ7 313 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 OR13D1Q8NGV5 346 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 TRMT10AQ8TBZ6 339 aaKnown RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 NRG4Q8WWG1 115 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms