RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SNRPNP63162 240 aaKnown RBP8.77□□□□□ -1
CLTCL1-202ENST00000427926 ZNF141Q15928 474 aa8.77□□□□□ -1
CLTCL1-202ENST00000427926 FA2HQ7L5A8 372 aa8.77□□□□□ -1
CLTCL1-202ENST00000427926 LYSMD2Q8IV50 215 aa8.77□□□□□ -1
CLTCL1-202ENST00000427926 OR4A4PQ8NGN8 299 aa8.77□□□□□ -1
CLTCL1-202ENST00000427926 SLC45A2Q9UMX9 530 aa8.77□□□□□ -1
CLTCL1-202ENST00000427926 ARRDC5A6NEK1 342 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 LIPT2A6NK58 231 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 WNT1P04628 370 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 CT62P0C5K7 136 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 CBLN3Q6UW01 205 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF547Q8IVP9 402 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 TMEM251Q8N6I4 163 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 HMGCLL1Q8TB92 370 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 SAP25Q8TEE9 199 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 ALG14Q96F25 216 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 URGCP-MRPS24S4R325 110 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 CD3DP04234 171 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 HOXB1P14653 301 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 AREGP15514 252 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 SPINK9Q5DT21 86 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 DEGS2Q6QHC5 323 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 ETV3LQ6ZN32 361 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 ABHD14AQ9BUJ0 271 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 OR2H1Q9GZK4 316 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 RPL7P18124 248 aaKnown RBP8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 PTBP1P26599 531 aaKnown RBP eCLIP8.77□□□□□ -1.015e-9■■■■■ 31.2
CLTCL1-202ENST00000427926 PRSS12P56730 875 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 ISL1P61371 349 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 LY6EQ16553 131 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 DCAF12L2Q5VW00 463 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF683Q8IZ20 524 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 AMER3Q8N944 861 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 NECAP1Q8NC96 275 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 PXT1Q8NFP0 134 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 RBPMSQ93062 196 aaKnown RBP8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 HARBI1Q96MB7 349 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 FAAP24Q9BTP7 215 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC7A10Q9NS82 523 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 RAXQ9Y2V3 346 aa8.77□□□□□ -1.01
CLTCL1-202ENST00000427926 CBR1P16152 277 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 PCNPQ8WW12 178 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ASB10Q8WXI3 467 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC25A46Q96AG3 418 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 C2orf50Q96LR7 162 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF230Q9UIE0 474 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ADAMTSL1Q8N6G6 1762 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 IFNL4K9M1U5 179 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 TRAPPC2P0DI81 140 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 TRAPPC2BP0DI82 140 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ERVFC1-1P60608 527 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ROM1Q03395 351 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 MAP6Q96JE9 813 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 LNP1A1A4G5 178 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 OR2T8A6NH00 312 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 EPOPA6NHQ4 379 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 NDUFS8O00217 210 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 SOX15O60248 233 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 PSMB6P28072 239 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 DGCR2P98153 550 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 FCN2Q15485 313 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 OR2M3Q8NG83 312 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 OR5M8Q8NGP6 311 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 SMIM7Q9BQ49 75 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 GABARAPL3Q9BY60 117 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 RANGRFQ9HD47 186 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ASCL3Q9NQ33 180 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 UGT2A1Q9Y4X1 527 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 LOC102723971A0A1B0GUV8 181 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 TCRBV16S1A1N1A0A5B0 115 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC17A2O00624 439 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 TXNDC12O95881 172 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 APELAP0DMC3 54 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 GP2P55259 537 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 BAK1Q16611 211 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ST3GAL2Q16842 350 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 WNT2BQ93097 391 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF501Q96CX3 271 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ORAI1Q96D31 301 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 UCN2Q96RP3 112 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 JMJD8Q96S16 334 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 TNFRSF12AQ9NP84 129 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 PIPOXQ9P0Z9 390 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 COL4A1P02462 1669 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 IGHV1-45A0A0A0MS14 117 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 MEOX2P50222 304 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC37A1P57057 533 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 LSM11P83369 360 aaKnown RBP eCLIP8.76□□□□□ -1.015e-12■■■■■ 52.1
CLTCL1-202ENST00000427926 WDR38Q5JTN6 314 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 OR10A7Q8NGE5 316 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 HGDQ93099 445 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC35B4Q969S0 331 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF714Q96N38 554 aa8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 C11orf54Q9H0W9 315 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 ISG20L2Q9H9L3 353 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-202ENST00000427926 GYPAP02724 150 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 LSM6P62312 80 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 SMAGPQ0VAQ4 97 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 ATP1A1-AS1Q5TC04 95 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 CELF2-AS1Q8N7Q2 184 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms