RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 AWAT1Q58HT5 328 aa12.14□□□□□ -0.47
RTN4-210ENST00000427710 C16orf87Q6PH81 154 aa12.14□□□□□ -0.47
RTN4-210ENST00000427710 NANOGP1Q8N7R0 232 aa12.14□□□□□ -0.47
RTN4-210ENST00000427710 TNFAIP8L1Q8WVP5 186 aa12.14□□□□□ -0.47
RTN4-210ENST00000427710 FAM192AQ9GZU8 254 aa12.14□□□□□ -0.47
RTN4-210ENST00000427710 ZMAT3Q9HA38 289 aaKnown RBP12.14□□□□□ -0.47
RTN4-210ENST00000427710 EXOSC4Q9NPD3 245 aaKnown RBP12.14□□□□□ -0.47
RTN4-210ENST00000427710 PAK1IP1Q9NWT1 392 aaPredicted RBP12.14□□□□□ -0.47
RTN4-210ENST00000427710 FAM96BQ9Y3D0 163 aa12.14□□□□□ -0.47
RTN4-210ENST00000427710 TRBV5-5A0A0J9YX44 114 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 FAM181BA6NEQ2 426 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 CLDN34H7C241 214 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 SH2D1BO14796 132 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 MAGEB3O15480 346 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 CDK1P06493 297 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 CD2P06729 351 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 ZNF44P15621 663 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 CFPP27918 469 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 UBE2E1P51965 193 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 WNT4P56705 351 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 DDI2Q5TDH0 399 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 NCR3LG1Q68D85 454 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 Q6P435 159 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 SAXO1Q8IYX7 474 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 ZSCAN4Q8NAM6 433 aaPredicted RBP12.13□□□□□ -0.47
RTN4-210ENST00000427710 OR5D13Q8NGL4 314 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 OR14A2Q96R54 314 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 PPA2Q9H2U2 334 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
RTN4-210ENST00000427710 GLS2Q9UI32 602 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 ING4Q9UNL4 249 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 PCDHGB5Q9Y5G0 923 aa12.13□□□□□ -0.47
RTN4-210ENST00000427710 TRAV8-7A0A075B6U6 113 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 C17orf98A8MV24 154 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 HSPB6O14558 160 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 CDRT1O95170 752 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 HTR3BO95264 441 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 ZNF728P0DKX0 622 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 IGFBP3P17936 291 aaPredicted RBP12.12□□□□□ -0.47
RTN4-210ENST00000427710 CELP19835 753 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 IER3P46695 156 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
RTN4-210ENST00000427710 SPIN3Q5JUX0 258 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 IZUMO2Q6UXV1 221 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 SSMEM1Q8WWF3 244 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 OR5M11Q96RB7 305 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 ZNF581Q9P0T4 197 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 SF3B6Q9Y3B4 125 aaKnown RBP12.12□□□□□ -0.47
RTN4-210ENST00000427710 TRRAPQ9Y4A5 3859 aa12.12□□□□□ -0.47
RTN4-210ENST00000427710 A0A1W2PPH5 198 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 H0YJX3 145 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 SLC33A1O00400 549 aaPredicted RBP12.11□□□□□ -0.47
RTN4-210ENST00000427710 MGST3O14880 152 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 DEGS1O15121 323 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 FBP1P09467 338 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 MDKP21741 143 aaPredicted RBP12.11□□□□□ -0.47
RTN4-210ENST00000427710 MYF6P23409 242 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 BDKRB2P30411 391 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 PPP3R1P63098 170 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 AESQ08117 197 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 INSL4Q14641 139 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 RSU1Q15404 277 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 TAF9Q16594 264 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 PIGYQ3MUY2 71 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 Q499Y3 187 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 YIF1BQ5BJH7 314 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 BAIAP2L2Q6UXY1 529 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 LDLRAD3Q86YD5 345 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 TBC1D15Q8TC07 691 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
RTN4-210ENST00000427710 SCN3BQ9NY72 215 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 ERGIC3Q9Y282 383 aa12.11□□□□□ -0.47
RTN4-210ENST00000427710 TRBV5-7A0A0A0MS05 114 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 A0A0G2JK05 382 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 A0A1W2PP11 408 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 PIN1P1O15428 100 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 MMP23AO75900 390 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 ATP6V1G2O95670 118 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 PAHP00439 452 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 ALDOBP05062 364 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 ZNF93P35789 620 aaPredicted RBP12.1□□□□□ -0.47
RTN4-210ENST00000427710 GLIPR1P48060 266 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 MTNR1BP49286 362 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 TAS2R43P59537 309 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 RELBQ01201 579 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 RIPK1Q13546 671 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 ATXN7L3Q14CW9 347 aaPredicted RBP12.1□□□□□ -0.47
RTN4-210ENST00000427710 LHFPL4Q7Z7J7 247 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 TRAPPC6BQ86SZ2 158 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 PXT1Q8NFP0 134 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 MYDGFQ969H8 173 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 COQ2Q96H96 371 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 ZNF714Q96N38 554 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 ZNF184Q99676 751 aaPredicted RBP12.1□□□□□ -0.47
RTN4-210ENST00000427710 HEXA-AS1Q9H8Q6 139 aa12.1□□□□□ -0.47
RTN4-210ENST00000427710 TMEM138Q9NPI0 162 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms