RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SHISA8B8ZZ34 492 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 TAPBPO15533 448 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 DXOO77932 396 aaKnown RBP5.09□□□□□ -1.6
HERC4-206ENST00000427635 PRSS2P07478 247 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 SBK3P0C264 359 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 TSPOP30536 169 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 PJVKQ0ZLH3 352 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 SLC17A1Q14916 467 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 OTUD1Q5VV17 481 aaPredicted RBP5.09□□□□□ -1.6
HERC4-206ENST00000427635 PRSS42Q7Z5A4 293 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 MRGPRGQ86SM5 289 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 LYSMD2Q8IV50 215 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 ZNF485Q8NCK3 441 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 OR4S1Q8NGB4 309 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 OR13F1Q8NGS4 319 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 MCHR2Q969V1 340 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 FLYWCH2Q96CP2 140 aaKnown RBP5.09□□□□□ -1.6
HERC4-206ENST00000427635 DOK1Q99704 481 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 DDA1Q9BW61 102 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 ZNF430Q9H8G1 570 aaPredicted RBP5.09□□□□□ -1.6
HERC4-206ENST00000427635 PIPOXQ9P0Z9 390 aa5.09□□□□□ -1.6
HERC4-206ENST00000427635 DIMT1Q9UNQ2 313 aaKnown RBP5.09□□□□□ -1.6
HERC4-206ENST00000427635 LOXHD1Q8IVV2 1947 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 C22orf46C9J442 243 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 MPDU1O75352 247 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 OR2F2O95006 317 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 TEAD1P28347 426 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 NHLH2Q02577 135 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 MMDQ15546 238 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 OR8I2Q8N0Y5 310 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 LILRA3Q8N6C8 439 aaPredicted RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 TP53I13Q8NBR0 393 aaPredicted RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 NFAM1Q8NET5 270 aaPredicted RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 OR5M8Q8NGP6 311 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 ISL2Q96A47 359 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 CACNA1FO60840 1977 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 IGLV3-10A0A075B6K4 115 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 IGHV5-51A0A0C4DH38 117 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 C5orf52A6NGY3 159 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 DEDDO75618 318 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 COX5BP10606 129 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 PMCHP20382 165 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 USF1P22415 310 aaPredicted RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 CALCRP30988 508 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 HERPUD1Q15011 391 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 FFAR4Q5NUL3 377 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 ZNF738Q8NE65 137 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 ZNF519Q8TB69 540 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 SH2D2AQ9NP31 389 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 SLC52A3Q9NQ40 469 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 ZNF727A8MUV8 499 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 JTBO76095 146 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 HAND1O96004 215 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 GAPDHP04406 335 aaKnown RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 RNASE1P07998 156 aaKnown RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 OR5AL1P0C617 328 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 MGMTP16455 207 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 PSMB1P20618 241 aaKnown RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 BCL3P20749 454 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 P2RY4P51582 365 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 FABP9Q0Z7S8 132 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 BTN1A1Q13410 526 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 ISXQ2M1V0 245 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 RPEL1Q2QD12 228 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 SLC25A35Q3KQZ1 300 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 CCSMST1Q4G0I0 132 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 FAM53AQ6NSI3 398 aaPredicted RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 GTSCR1Q86UQ5 136 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 OR10A7Q8NGE5 316 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 MAP6Q96JE9 813 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 OR5M11Q96RB7 305 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 ALKBH7Q9BT30 221 aaPredicted RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 MAGT1Q9H0U3 335 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 UBQLN3Q9H347 655 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 MYOM1P52179 1685 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 TFAP2AP05549 437 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 ETFDHQ16134 617 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 HAGHQ16775 308 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 PAQR6Q6TCH4 344 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 FAM219AQ8IW50 185 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 OR4C13Q8NGP0 309 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 LHFPL5Q8TAF8 219 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 RPUSD4Q96CM3 377 aaKnown RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 CSAG2Q9Y5P2 127 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 BAZ2AQ9UIF9 1905 aaKnown RBP5.08□□□□□ -1.6
HERC4-206ENST00000427635 ZNF32P17041 273 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 GNG4P50150 75 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 DCAF10Q5QP82 559 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 LHX8Q68G74 356 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 TMEM92Q6UXU6 159 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 PXT1Q8NFP0 134 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 OR10R2Q8NGX6 335 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 MYOZ3Q8TDC0 251 aa5.08□□□□□ -1.6
HERC4-206ENST00000427635 MYH3P11055 1940 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 LOC105371242A0A075B767 164 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 IGHV3OR15-7A0A075B7D8 119 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 A0A1B0GU03 582 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 CD80P33681 288 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 HLXQ14774 488 aaPredicted RBP5.07□□□□□ -1.6
HERC4-206ENST00000427635 ZNF774Q6NX45 483 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms