RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CDKN1AP38936 164 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 GZMKP49863 264 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 ARFRP1Q13795 201 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF626Q68DY1 528 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 DTX2Q86UW9 622 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 ZCCHC24Q8N2G6 241 aaKnown RBP13.27□□□□□ -0.29
SHOX2-202ENST00000425436 OR4D10Q8NGI6 311 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 OR5A2Q8NGI9 324 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 IGFBPL1Q8WX77 278 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 DVL3Q92997 716 aaPredicted RBP13.27□□□□□ -0.29
SHOX2-202ENST00000425436 ARHGAP5-AS1Q96IT6 56 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 Q96M66 194 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 DMRTB1Q96MA1 342 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 KCNK7Q9Y2U2 307 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 USF3Q68DE3 2245 aa13.27□□□□□ -0.29
SHOX2-202ENST00000425436 MAP1AP78559 2803 aaPredicted RBP13.26□□□□□ -0.29
SHOX2-202ENST00000425436 MEIKINA0A087WXM9 373 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ANKRD30BLA7E2S9 258 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF850A8MQ14 1090 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 B9A039 149 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 HTR3BO95264 441 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF735P0CB33 412 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 DNASE1P24855 282 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 PMELP40967 661 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 KLF3P57682 345 aaPredicted RBP13.26□□□□□ -0.29
SHOX2-202ENST00000425436 TAS2R46P59540 309 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 PSG7Q13046 419 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 EFNB3Q15768 340 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 VAX1Q5SQQ9 334 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 C11orf71Q6IPW1 123 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 SLC36A1Q7Z2H8 476 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 C1orf174Q8IYL3 243 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ZDHHC23Q8IYP9 409 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ARRDC1Q8N5I2 433 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ZDHHC22Q8N966 263 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 OR56B2PQ8NGI1 322 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 OR4K15Q8NH41 348 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 NUDCD2Q8WVJ2 157 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ASB13Q8WXK3 278 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ST8SIA4Q92187 359 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 SCGB3A2Q96PL1 93 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 PAPOLGQ9BWT3 736 aaKnown RBP13.26□□□□□ -0.29
SHOX2-202ENST00000425436 BEX2Q9BXY8 128 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 PECRQ9BY49 303 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 TINAGL1Q9GZM7 467 aaPredicted RBP13.26□□□□□ -0.29
SHOX2-202ENST00000425436 PLEKHJ1Q9NW61 149 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 TAAR3PQ9P1P4 343 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF222Q9UK12 451 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 EDARQ9UNE0 448 aa13.26□□□□□ -0.29
SHOX2-202ENST00000425436 A0A1W2PP11 408 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 PQLC2LA1A4F0 135 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A10PA6NDY2 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A18PA6NE21 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A16PA6NEW6 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A20PA6NIJ5 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A8PA6NJQ4 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A7PA6NKC0 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 CD300LBA8K4G0 201 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A22PA8MWA6 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A12PA8MX19 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A5PA8MXJ8 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A23PA8MXZ1 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 SSX5O60225 188 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A15PP0C7V4 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A13PP0C7W8 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A14PP0C7W9 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 FAM90A24PP0C7X0 464 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 SELENOVP59797 346 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 PRDX4Q13162 271 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 CDK10Q15131 360 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 MBNL2Q5VZF2 373 aaKnown RBP13.25□□□□□ -0.29
SHOX2-202ENST00000425436 TMEM17Q86X19 198 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 HOGA1Q86XE5 327 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 OSR2Q8N2R0 312 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 Q8NFD4 153 aa13.25□□□□□ -0.29
SHOX2-202ENST00000425436 ELF5Q9UKW6 265 aaPredicted RBP13.25□□□□□ -0.29
SHOX2-202ENST00000425436 IGLV3-9A0A075B6K5 115 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 IGKV1-27A0A075B6S5 117 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 TMEM82A0PJX8 343 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 FAM172BPA6NC97 362 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 M0QYG6 137 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 HPXP02790 462 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 FCER2P06734 321 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 SELEP16581 610 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 ANXA7P20073 488 aaKnown RBP13.24□□□□□ -0.29
SHOX2-202ENST00000425436 SNRPD2P62316 118 aaKnown RBP13.24□□□□□ -0.29
SHOX2-202ENST00000425436 OR2T2Q6IF00 324 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 FAHD2BQ6P2I3 314 aaPredicted RBP13.24□□□□□ -0.29
SHOX2-202ENST00000425436 FBXW12Q6X9E4 464 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 MKXQ8IYA7 352 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 BEST4Q8NFU0 473 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 OR11H7Q8NGC8 314 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 OR10K1Q8NGX5 313 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 OR51F2Q8NH61 342 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 GTF3AQ92664 365 aaKnown RBP13.24□□□□□ -0.29
SHOX2-202ENST00000425436 FAHD2AQ96GK7 314 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 SLC6A7Q99884 636 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 CHST6Q9GZX3 395 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 RHOFQ9HBH0 211 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF69Q9UC07 566 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms