RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 IAH1Q2TAA2 248 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 SMIM21Q3B7S5 101 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 KIAA1644Q3SXP7 199 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF684Q5T5D7 378 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 TMEM78Q5T7P6 136 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 Q6ZTC4 211 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 NEGR1Q7Z3B1 354 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 NFE4Q86UQ8 179 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 NAA40Q86UY6 237 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 ZFP41Q8N8Y5 198 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 OR8J3Q8NGG0 315 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 OR51S1Q8NGJ8 323 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 OR2A12Q8NGT7 310 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 SPPL2BQ8TCT7 592 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 SSC4DQ8WTU2 575 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 C1orf54Q8WWF1 131 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 SRSF12Q8WXF0 261 aaKnown RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 RGP1Q92546 391 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 CLDN23Q96B33 292 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 FAM3DQ96BQ1 224 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 DCPSQ96C86 337 aaKnown RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 SEH1LQ96EE3 360 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 GALNT14Q96FL9 552 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 MRPL48Q96GC5 212 aaKnown RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 FMC1Q96HJ9 113 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 METTL26Q96S19 204 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 PLEKHF1Q96S99 279 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 KLF6Q99612 283 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 RTBDNQ9BSG5 229 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 ULBP3Q9BZM4 244 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 DDX31Q9H8H2 851 aaKnown RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 LRTM1Q9HBL6 345 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 SH2D2AQ9NP31 389 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 UBQLN4Q9NRR5 601 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 RASL12Q9NYN1 266 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 IDI2-AS1Q9NZ38 188 aa2.91□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF629Q9UEG4 869 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-205ENST00000424674 DOCK7Q96N67 2140 aa2.9□□□□□ -1.94
SF3B1-205ENST00000424674 PALLDQ8WX93 1383 aa2.9□□□□□ -1.94
SF3B1-205ENST00000424674 DCAF1Q9Y4B6 1507 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 TRAV8-6A0A0B4J262 113 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 IGKV1D-13A0A0B4J2D9 117 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 FAM172BPA6NC97 362 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 MAP1LC3B2A6NCE7 125 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ARL5CA6NH57 179 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 G3V2L1 256 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 K7EQG2 157 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 EIF1BO60739 113 aaKnown RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ARL6IP5O75915 188 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 IGKV1D-16P01601 117 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 IGKV5-2P06315 115 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 BPGMP07738 259 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 IGKV1-13P0DP09 117 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ESDP10768 282 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 CYBAP13498 195 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 GABRA1P14867 456 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SPNP16150 400 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 NELFEP18615 380 aaKnown RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 RAB3BP20337 219 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 GZMHP20718 246 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 GGT2P36268 569 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 NUDT1P36639 197 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 EIF1P41567 113 aaKnown RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 LGALS7P47929 136 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 REG1BP48304 166 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 MARCKSL1P49006 195 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 MEOX2P50222 304 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SLC18A1P54219 525 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 CYCSP99999 105 aaKnown RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 TCP10Q12799 353 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SURF2Q15527 256 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 CCL14Q16627 93 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 WDR38Q5JTN6 314 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 AKR1C8PQ5T2L2 129 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 RSBN1Q5VWQ0 802 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SAMD13Q5VXD3 122 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 C4orf22Q6V702 233 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 SLC16A13Q7RTY0 426 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 PTAR1Q7Z6K3 402 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 OOSP2Q86WS3 158 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 LRRC28Q86X40 367 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 C17orf82Q86X59 251 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 DOLPP1Q86YN1 238 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ZBTB8OSQ8IWT0 167 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 UBALD2Q8IYN6 164 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 MUC15Q8N387 334 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 LRRC18Q8N456 261 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 FAM71E2Q8N5Q1 922 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 OR51A2Q8NGJ7 313 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 OR1N2Q8NGR9 330 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 OR9A2Q8NGT5 310 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 OR10J6PQ8NGY7 276 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ZNRF2Q8NHG8 242 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF420Q8TAQ5 688 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 ABHD3Q8WU67 409 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 LRRC29Q8WV35 223 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 L3HYPDHQ96EM0 354 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 CNRIP1Q96F85 164 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-205ENST00000424674 CNBD2Q96M20 576 aa2.9□□□□□ -1.95
SF3B1-205ENST00000424674 TBX5Q99593 518 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms