RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 ELL3Q9HB65 397 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-205ENST00000423941 TCF7L1Q9HCS4 588 aa15.21■□□□□ 0.03
HDAC6-205ENST00000423941 GLS2Q9UI32 602 aa15.21■□□□□ 0.03
HDAC6-205ENST00000423941 GSTK1Q9Y2Q3 226 aa15.21■□□□□ 0.03
HDAC6-205ENST00000423941 ZNF780AO75290 641 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-205ENST00000423941 ARL6IP5O75915 188 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 OR2H2O95918 312 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 IL13RA2Q14627 380 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 C11orf42Q8N5U0 333 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 Q8N7P7 452 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 OR4D6Q8NGJ1 314 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 TBC1D15Q8TC07 691 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 TBX15Q96SF7 602 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 IFT22Q9H7X7 185 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 UNKLQ9H9P5 680 aaKnown RBP15.2■□□□□ 0.02
HDAC6-205ENST00000423941 ING4Q9UNL4 249 aa15.2■□□□□ 0.02
HDAC6-205ENST00000423941 A0A0G2JK05 382 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 ERP29P30040 261 aaKnown RBP15.19■□□□□ 0.02
HDAC6-205ENST00000423941 FGF9P31371 208 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-205ENST00000423941 SRP14P37108 136 aaKnown RBP15.19■□□□□ 0.02
HDAC6-205ENST00000423941 OR3A1P47881 315 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 ARF6P62330 175 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 GPR176Q14439 515 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 RSU1Q15404 277 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 TMEM200BQ69YZ2 307 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 JAGN1Q8N5M9 183 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 CHST4Q8NCG5 386 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 OR10K1Q8NGX5 313 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 H1FXQ92522 213 aaKnown RBP15.19■□□□□ 0.02
HDAC6-205ENST00000423941 MUL1Q969V5 352 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 MRPS24Q96EL2 167 aaKnown RBP15.19■□□□□ 0.02
HDAC6-205ENST00000423941 GFI1Q99684 422 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 EXOSC4Q9NPD3 245 aaKnown RBP15.19■□□□□ 0.02
HDAC6-205ENST00000423941 PCDHB16Q9NRJ7 776 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 C19orf12Q9NSK7 152 aa15.19■□□□□ 0.02
HDAC6-205ENST00000423941 MRPS28Q9Y2Q9 187 aaKnown RBP15.19■□□□□ 0.02
HDAC6-205ENST00000423941 TRAV1-2A0A0B4J238 106 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 M0R1W7 72 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 TOX4O94842 621 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 HTR3BO95264 441 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 CSN2P05814 226 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 PSMB9P28065 219 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 METAP1DQ6UB28 335 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-205ENST00000423941 OSR2Q8N2R0 312 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 ASCC1Q8N9N2 400 aaKnown RBP15.18■□□□□ 0.02
HDAC6-205ENST00000423941 TSPAN14Q8NG11 270 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 OR4S1Q8NGB4 309 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 FAM192AQ9GZU8 254 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 GHRLQ9UBU3 117 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 NUP50Q9UKX7 468 aa15.18■□□□□ 0.02
HDAC6-205ENST00000423941 CUBNO60494 3623 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 A0A087WXM4 84 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 SLC33A1O00400 549 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-205ENST00000423941 MGST3O14880 152 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 SLC22A1O15245 554 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 CAPZA1P52907 286 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 SNU13P55769 128 aaKnown RBP15.17■□□□□ 0.02
HDAC6-205ENST00000423941 DLX6P56179 175 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 RBM11P57052 281 aaKnown RBP15.17■□□□□ 0.02
HDAC6-205ENST00000423941 RPL31P62899 125 aaKnown RBP15.17■□□□□ 0.02
HDAC6-205ENST00000423941 PAX5Q02548 391 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 KRTAP21-3Q3LHN1 58 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 METTL11BQ5VVY1 283 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 GLT8D1Q68CQ7 371 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 GLIPR1L1Q6UWM5 242 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 C9orf139Q6ZV77 190 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 TNFRSF14Q92956 283 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 SLC25A28Q96A46 364 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 SLITRK2Q9H156 845 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 ST3GAL6Q9Y274 331 aa15.17■□□□□ 0.02
HDAC6-205ENST00000423941 TRAV24A0A0B4J272 114 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 A0A1W2PP11 408 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 SHISA3A0PJX4 238 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 DEGS1O15121 323 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 CSTBP04080 98 aaKnown RBP15.16■□□□□ 0.02
HDAC6-205ENST00000423941 GTF2F2P13984 249 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 JUNBP17275 347 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-205ENST00000423941 CFPP27918 469 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 BPIFB3P59826 476 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 MEF2CQ06413 473 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-205ENST00000423941 PDCD1Q15116 288 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 PIGYQ3MUY2 71 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 SLC22A6Q4U2R8 563 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 GDPD3Q7L5L3 318 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 TCF23Q7RTU1 214 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 LINC00596Q86U02 117 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 PPP1R35Q8TAP8 253 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 NR1H4Q96RI1 486 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-205ENST00000423941 S100A13Q99584 98 aa15.16■□□□□ 0.02
HDAC6-205ENST00000423941 CENPVL3A0A0U1RRI6 287 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 SIRPB1O00241 398 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 UBBP0CG47 229 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 IGHV4-38-2P0DP08 117 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 EPHA1P21709 976 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 GABRR1P24046 479 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 PRTN3P24158 256 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 CALRP27797 417 aaKnown RBP15.15■□□□□ 0.02
HDAC6-205ENST00000423941 QRFPP83859 136 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 GRK1Q15835 563 aa15.15■□□□□ 0.02
HDAC6-205ENST00000423941 MPV17LQ2QL34 196 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms