RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 METTL15A6NJ78 407 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ANKRD30BLA7E2S9 258 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ANKRD65E5RJM6 399 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 H0YAE9 185 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 H0YJX3 145 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 M0R129 80 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ENTPD6O75354 484 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 RP2O75695 350 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 SULT1C4O75897 302 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 LY6HO94772 140 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 FSTL3O95633 263 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 FADS2O95864 444 aaKnown RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 LY6G6DO95868 133 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 KRT8P05787 483 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 MRPL3P09001 348 aaKnown RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 SLC2A1P11166 492 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 RIDAP52758 137 aaKnown RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF121P58317 390 aaPredicted RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 CXCR4P61073 352 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 FAM3AP98173 230 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF92Q03936 586 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 SLC34A1Q06495 639 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF181Q2M3W8 571 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 VWC2Q2TAL6 325 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 HFEQ30201 348 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF829Q3KNS6 432 aaPredicted RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 SNAI3Q3KNW1 292 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM255AQ5JRV8 349 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 WDR38Q5JTN6 314 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 GLYATL3Q5SZD4 288 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 OGFRL1Q5TC84 451 aaPredicted RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 LRRN1Q6UXK5 716 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 OR5AS1Q8N127 324 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 CCDC54Q8NEL0 328 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 OR2Z1Q8NG97 314 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 OR51G2Q8NGK0 314 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 GTF3AQ92664 365 aaKnown RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 YIPF5Q969M3 257 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 MRPL48Q96GC5 212 aaKnown RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 TIMD4Q96H15 378 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ST6GAL2Q96JF0 529 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 MBOAT4Q96T53 435 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 VCXQ9H320 206 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ABCB9Q9NP78 766 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF275Q9NSD4 429 aaPredicted RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 DNAJC27Q9NZQ0 273 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 IKZF2Q9UKS7 526 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 COPS3Q9UNS2 423 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 EXOGQ9Y2C4 368 aaKnown RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 KLHDC2Q9Y2U9 406 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 RPL36Q9Y3U8 105 aaKnown RBP2.06□□□□□ -2.08
VPS13A-208ENST00000423463 N6AMT1Q9Y5N5 214 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 MPC1Q9Y5U8 109 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 HSPE1-MOB4S4R3N1 261 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 RELNP78509 3460 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 FBN2P35556 2912 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 MYO9AB2RTY4 2548 aa2.06□□□□□ -2.08
VPS13A-208ENST00000423463 hCG_38984A0A1B0GV85 526 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 A0A1W2PPQ1 181 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 A0A1W2PQL4 384 aaPredicted RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 DAPL1A0PJW8 107 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 IRGMA1A4Y4 181 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 C5orf63A6NC05 138 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ERICH4A6NGS2 130 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PRR32B1ATL7 298 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CLDN25C9JDP6 229 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LOC110117498-PIK3R3F6TDL0 507 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LYNX1G3V0Z9 82 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TRIM77I1YAP6 450 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 DLGAP1O14490 977 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PPIHO43447 177 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CD5LO43866 347 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CIDEAO60543 219 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 MTRF1O75570 445 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PTBP3O95758 552 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CST4P01036 141 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 RPSAP08865 295 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LYNX1P0DP58 116 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CD200P41217 278 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 KRTAP10-6P60371 365 aaPredicted RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ACTC1P68032 377 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ACTA1P68133 377 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ADARB1P78563 741 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 RAB40BQ12829 278 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 GAGE5Q13069 117 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 GAGE6Q13070 117 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 MRPL28Q13084 256 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PLA2G7Q13093 441 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 RIPK1Q13546 671 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR8G1Q15617 311 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR8B8Q15620 311 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LRRC36Q1X8D7 754 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM249Q2WGJ8 235 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF684Q5T5D7 378 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CYB5R2Q6BCY4 276 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 Q6ZSR3 168 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ENTHD1Q8IYW4 607 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ELMOD2Q8IZ81 293 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 SYS1Q8N2H4 156 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 FTMTQ8N4E7 242 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms