RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 FAM19A2Q8N3H0 131 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 OR4K14Q8NGD5 310 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SLC45A2Q9UMX9 530 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 UFC1Q9Y3C8 167 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SHANK3Q9BYB0 1731 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 HYPMO75409 117 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 CRISP2P16562 243 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 CNN1P51911 297 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 HIST1H1AQ02539 215 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 STAC2Q6ZMT1 411 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 UCN2Q96RP3 112 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 HES4Q9HCC6 221 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 TBL2Q9Y4P3 447 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 OR5B21A6NL26 309 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 RHBDL1O75783 438 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PPP2CBP62714 309 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PPP2CAP67775 309 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PRSS8Q16651 343 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 OR2C3Q8N628 320 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 TDRD15B5MCY1 1934 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 MBLAC1A4D2B0 266 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SRPXP78539 464 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 TM4SF20Q53R12 229 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PRAP1Q96NZ9 151 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 NUPR1O60356 82 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 WBP2Q969T9 261 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 DUSP15Q9H1R2 295 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 NUDT21O43809 227 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 NAT8BQ9UHF3 227 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 COLQQ9Y215 455 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 HMGA2P52926 109 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 HSD52Q0P140 79 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 MS4A6EQ96DS6 147 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 MTCH1Q9NZJ7 389 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 RHBDD3Q9Y3P4 386 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SCN2AQ99250 2005 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 H7C1C5 153 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 MT-ATP6P00846 226 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SRP19P09132 144 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF485Q8NCK3 441 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ENY2Q9NPA8 101 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SF3B6Q9Y3B4 125 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 C19orf67A6NJJ6 358 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 DUSP11O75319 330 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 TCTN1Q2MV58 587 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PLPPR5Q32ZL2 321 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 WDR82Q6UXN9 313 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PERPQ96FX8 193 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 CXorf36Q9H7Y0 433 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 NPIPB7O75200 414 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM225BP0DP42 221 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF708P17019 499 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SLC25A1P53007 311 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 GDF7Q7Z4P5 450 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 OR52M1Q8NGK5 317 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 VN1R1Q9GZP7 353 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 F11RQ9Y624 299 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SLC16A7O60669 478 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ID1P41134 155 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 RPS16P62249 146 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PLCXD2Q0VAA5 305 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 CD200R1LQ6Q8B3 271 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 NMNAT3Q96T66 252 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 A0A087WUU8 490 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF737O75373 536 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 HARBI1Q96MB7 349 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 TPPP3Q9BW30 176 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PECRQ9BY49 303 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 A0A0G2JK05 382 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 TAS2R4Q9NYW5 299 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 LRRC3CA6NJW4 275 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 CD1BP29016 333 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SRSF5Q13243 272 aaKnown RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 BMFQ96LC9 184 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 STC2O76061 302 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SFT2D2O95562 160 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 RTP5Q14D33 572 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF74Q16587 644 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ADAMTSL5Q6ZMM2 481 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 TUSC5Q8IXB3 177 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 OR8G5Q8NG78 346 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SPINT1O43278 529 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ADH4P08319 380 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ARF6P62330 175 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ICAM4Q14773 271 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SHISA2Q6UWI4 295 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 SBSNQ6UWP8 590 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 OR1L3Q8NH93 324 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 C1orf198Q9H425 327 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PRSS21Q9Y6M0 314 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 RTTNQ86VV8 2226 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 A0A0D9SEW6 157 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 RAMP3O60896 148 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ARRB1P49407 418 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-212ENST00000423061 INSL5Q9Y5Q6 135 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 PRSS54Q6PEW0 395 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 STPG3Q8N7X2 389 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF480Q8WV37 535 aa3.02□□□□□ -1.93
SYNE1-212ENST00000423061 CCL16O15467 120 aa3.01□□□□□ -1.93
SYNE1-212ENST00000423061 GYPAP02724 150 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms