RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ENOPH1Q9UHY7 261 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 GNG8Q9UK08 70 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 KIAA2026Q5HYC2 2103 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 IGKV1-12A0A0C4DH73 117 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 TCRBV4S1A1TA0A5B7 111 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 SIRPB1O00241 398 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 IGKV1D-12P01611 117 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 IGLV1-47P01700 117 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 PRKACBP22694 351 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 CDK2P24941 298 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 FASP25445 335 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 BRS3P32247 399 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 ATP6V1E1P36543 226 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 GDNFP39905 211 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 CDC42P60953 191 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 PDZK1IP1Q13113 114 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 TMEM244Q5VVB8 128 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 OR52W1Q6IF63 320 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 HEPN1Q6WQI6 88 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 CCDC121Q6ZUS5 278 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 RTN4RL2Q86UN3 420 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 OR8J1Q8NGP2 316 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 OR2G2Q8NGZ5 317 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 CORO2AQ92828 525 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 STMN2Q93045 179 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 EME1Q96AY2 570 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 FGGYQ96C11 551 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 GLS2Q9UI32 602 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 GSTK1Q9Y2Q3 226 aa11.83□□□□□ -0.52
RPS28-201ENST00000417088 TSSC4Q9Y5U2 329 aaPredicted RBP11.83□□□□□ -0.52
RPS28-201ENST00000417088 KMT2CQ8NEZ4 4911 aaKnown RBP11.82□□□□□ -0.52
RPS28-201ENST00000417088 TRGV10A0A0A0MS01 117 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 SH2D1BO14796 132 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 MPIG6BO95866 241 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 OR2H2O95918 312 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 LPLP06858 475 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 PF4V1P10720 104 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 CD34P28906 385 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 GLIPR1P48060 266 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 AESQ08117 197 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 TMED1Q13445 227 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 ABCA11PQ4W5N1 156 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 LHFPL2Q6ZUX7 228 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 RNF144BQ7Z419 303 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 FAM220AQ7Z4H9 259 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 ZNF596Q8TC21 504 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 CAPSLQ8WWF8 208 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 MYDGFQ969H8 173 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 RFT1Q96AA3 541 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 RBM14Q96PK6 669 aaKnown RBP11.82□□□□□ -0.52
RPS28-201ENST00000417088 SLC25A33Q9BSK2 321 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 ZNF286AQ9HBT8 521 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 EXOSC4Q9NPD3 245 aaKnown RBP11.82□□□□□ -0.52
RPS28-201ENST00000417088 TAS2R3Q9NYW6 316 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.82□□□□□ -0.52
RPS28-201ENST00000417088 HHLA2Q9UM44 414 aa11.82□□□□□ -0.52
RPS28-201ENST00000417088 FUOMA2VDF0 154 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 FAM172BPA6NC97 362 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 SH2D7A6NKC9 451 aaPredicted RBP11.81□□□□□ -0.52
RPS28-201ENST00000417088 LEUTXA8MZ59 168 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 K7EIL1 84 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 OR2F2O95006 317 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 PF4P02776 101 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 AMY1AP04745 511 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 AMY2AP04746 511 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 ZNF20P17024 532 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 LMO1P25800 156 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 C10orf99Q6UWK7 81 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 RFKQ969G6 155 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 SPSB1Q96BD6 273 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 OPALINQ96PE5 141 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 MBOAT4Q96T53 435 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 GABARAPL3Q9BY60 117 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 COMMD4Q9H0A8 199 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 RIBC2Q9H4K1 309 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 FRRS1LQ9P0K9 344 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 AP4S1Q9Y587 144 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 NBEAL2Q6ZNJ1 2754 aa11.81□□□□□ -0.52
RPS28-201ENST00000417088 LY6LH3BQJ8 138 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 BUB1B-PAK6H3BSN5 160 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 KDM4BO94953 1096 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 ISG15P05161 165 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 ARHGDIBP52566 201 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 NANOS3P60323 173 aaKnown RBP11.8□□□□□ -0.52
RPS28-201ENST00000417088 SLC35A2P78381 396 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 KPNB1Q14974 876 aaKnown RBP11.8□□□□□ -0.52
RPS28-201ENST00000417088 HLA-DRB5Q30154 266 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 UTF1Q5T230 341 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 TPTE2P1Q5T6R2 138 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 Q6P435 159 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 FDX2Q6P4F2 183 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 OR4X2Q8NGF9 303 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 OR10AC1Q8NH08 325 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 BCAS4Q8TDM0 211 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 COQ2Q96H96 371 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 RCC1LQ96I51 464 aaKnown RBP11.8□□□□□ -0.52
RPS28-201ENST00000417088 SPACA5Q96QH8 159 aa11.8□□□□□ -0.52
RPS28-201ENST00000417088 INPP5EQ9NRR6 644 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms