RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 RBM39Q14498 530 aaKnown RBP13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 ZNF146Q15072 292 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 ZNF829Q3KNS6 432 aaPredicted RBP13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 SLC35D3Q5M8T2 416 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 SLX4IPQ5VYV7 408 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 CCDC144NLQ6NUI1 221 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 SLC25A26Q70HW3 274 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 ELMOD2Q8IZ81 293 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 DRAM1Q8N682 238 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 EMG1Q92979 244 aaKnown RBP13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 CREB3L1Q96BA8 519 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 RBFOX1Q9NWB1 397 aaKnown RBP13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 TAS2R3Q9NYW6 316 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 SLC7A11Q9UPY5 501 aa13.43□□□□□ -0.26
UBE2D4-202ENST00000415051 TRGV10A0A0A0MS01 117 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 CCDC182A6NF36 153 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 DHRS7CA6NNS2 312 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 H3BN98 237 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 TOR1AO14656 332 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 MAGEB4O15481 346 aaPredicted RBP13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 ENTPD6O75354 484 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 LY86O95711 162 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 HCKP08631 526 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 MRPL3P09001 348 aaKnown RBP13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 CALCBP10092 127 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 TMEM11P17152 192 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 GLIPR1P48060 266 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 RIDAP52758 137 aaKnown RBP13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 HNF4GQ14541 408 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 PNLIPRP3Q17RR3 467 aa13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 SAMHD1Q9Y3Z3 626 aaKnown RBP13.42□□□□□ -0.26
UBE2D4-202ENST00000415051 CCRL2O00421 344 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 BCL3P20749 454 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 CCL1P22362 96 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 PRRX1P54821 245 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 RPS7P62081 194 aaKnown RBP13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 CBX1P83916 185 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 CFHR3Q02985 330 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 AESQ08117 197 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 APOFQ13790 326 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 GINS1Q14691 196 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 C17orf58Q2M2W7 97 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 ASPHD1Q5U4P2 390 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 PLEKHG7Q6ZR37 379 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 FOXRED2Q8IWF2 684 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 OR10G2Q8NGC3 310 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 TOMM40LQ969M1 308 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 CMTM5Q96DZ9 223 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 FEVQ99581 238 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 TM2D3Q9BRN9 247 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 GTF2A1LQ9UNN4 478 aa13.41□□□□□ -0.26
UBE2D4-202ENST00000415051 TCRBV5S2A0A599 114 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 LOC110117498-PIK3R3F6TDL0 507 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 SIRPB1O00241 398 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 E2F6O75461 281 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 SNU13P55769 128 aaKnown RBP13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 FOXE3Q13461 319 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 GPR50Q13585 617 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 HES1Q14469 280 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 BCL2L15Q5TBC7 163 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 C16orf89Q6UX73 402 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 CYP2R1Q6VVX0 501 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 ENTHD1Q8IYW4 607 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 FAM58AQ8N1B3 248 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 C4orf3Q8WVX3 66 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 RPEQ96AT9 228 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 ZMAT4Q9H898 229 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 OR52A1Q9UKL2 312 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 R4GMQ9 66 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 DNAH10Q8IVF4 4471 aa13.4□□□□□ -0.26
UBE2D4-202ENST00000415051 TRBV2A0A0J9YWF9 115 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 AP4M1O00189 453 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 IGKV1D-33P01593 117 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 IGKV1-33P01594 117 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 PTGFRP43088 359 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 GPR12P47775 334 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 CDK5Q00535 292 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 KPNB1Q14974 876 aaKnown RBP13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 CXorf66Q5JRM2 361 aaPredicted RBP13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 OR2T5Q6IEZ7 315 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 OR2T29Q8NH02 315 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 OR9G1Q8NH87 305 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 ASB17Q8WXJ9 295 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 LEAP2Q969E1 77 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 COQ2Q96H96 371 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 KIRREL1Q96J84 757 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 MOB1AQ9H8S9 216 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 REEP1Q9H902 201 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 PCDHB16Q9NRJ7 776 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 IKZF2Q9UKS7 526 aa13.39□□□□□ -0.27
UBE2D4-202ENST00000415051 ODAMA1E959 279 aa13.38□□□□□ -0.27
UBE2D4-202ENST00000415051 H3BSH0 61 aa13.38□□□□□ -0.27
UBE2D4-202ENST00000415051 OR2H2O95918 312 aa13.38□□□□□ -0.27
UBE2D4-202ENST00000415051 ELANEP08246 267 aa13.38□□□□□ -0.27
UBE2D4-202ENST00000415051 CGB3P0DN86 165 aa13.38□□□□□ -0.27
UBE2D4-202ENST00000415051 CGB7P0DN87 165 aa13.38□□□□□ -0.27
UBE2D4-202ENST00000415051 PRKACAP17612 351 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms