RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PSG4Q00888 419 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 ZNF658BQ4V348 819 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 CD200R1LQ6Q8B3 271 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 FAM219AQ8IW50 185 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 FRZBQ92765 325 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 SSX3Q99909 188 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 MYOFQ9NZM1 2061 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 RECKO95980 971 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 RPS2P15880 293 aaKnown RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 KLRB1Q12918 225 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 BAMBIQ13145 260 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 TMEM105Q8N8V8 129 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 C1orf162Q8NEQ5 155 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 OR1K1Q8NGR3 316 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 HSD17B10Q99714 261 aaKnown RBP10.47□□□□□ -0.73
PTPRF-205ENST00000414879 NDFIP1Q9BT67 221 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 SLC7A10Q9NS82 523 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 ANKRD36A6QL64 1941 aa10.47□□□□□ -0.73
PTPRF-205ENST00000414879 A0A1W2PR80 420 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 AQP7O14520 342 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 C1orf100Q5SVJ3 147 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 FAAP20Q6NZ36 180 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 SSX9Q7RTT3 188 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 MARS2Q96GW9 593 aaKnown RBP10.46□□□□□ -0.73
PTPRF-205ENST00000414879 ABHD1Q96SE0 405 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 RNF2Q99496 336 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 AKR7A2O43488 359 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 TRAF3IP2O43734 574 aaPredicted RBP10.46□□□□□ -0.73
PTPRF-205ENST00000414879 CT45A10P0DMU9 189 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 PI3P19957 117 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 GABRA4P48169 554 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 UCP2P55851 309 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 UBE2G1P62253 170 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 HLA-DRB3P79483 266 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 HIKESHIQ53FT3 197 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 TMEM54Q969K7 222 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 PIPOXQ9P0Z9 390 aa10.46□□□□□ -0.73
PTPRF-205ENST00000414879 LPAR6P43657 344 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 LYG1Q8N1E2 194 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 LILRB1Q8NHL6 650 aaPredicted RBP10.46□□□□□ -0.74
PTPRF-205ENST00000414879 LHX4Q969G2 390 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 ADGRG7Q96K78 797 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 RCL1Q9Y2P8 373 aaKnown RBP10.46□□□□□ -0.74
PTPRF-205ENST00000414879 PIKFYVEQ9Y2I7 2098 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 SCN5AQ14524 2016 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 IGLV3-32A0A0A0MS00 114 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 IGHV3-64DA0A0J9YX35 117 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 LOC101059948A0A1B0GTJ6 334 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 NTN3O00634 580 aaPredicted RBP10.46□□□□□ -0.74
PTPRF-205ENST00000414879 LANCL1O43813 399 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 CRYZL1O95825 349 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 METTL15P1P0C7V9 234 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 OR3A1P47881 315 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 TLE1Q04724 770 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 HOGA1Q86XE5 327 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 CCDC71Q8IV32 467 aaPredicted RBP10.46□□□□□ -0.74
PTPRF-205ENST00000414879 TMEM171Q8WVE6 324 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 SEBOXQ9HB31 216 aaPredicted RBP10.46□□□□□ -0.74
PTPRF-205ENST00000414879 HES4Q9HCC6 221 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 ONECUT1Q9UBC0 465 aa10.46□□□□□ -0.74
PTPRF-205ENST00000414879 VSIG8P0DPA2 414 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 VDAC1P21796 283 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 C3AR1Q16581 482 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 PRSS54Q6PEW0 395 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 UQCC3Q6UW78 93 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 TXN2Q99757 166 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 UQCC1Q9NVA1 299 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 PSG11Q9UQ72 335 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 PCM1Q15154 2024 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 DOCK6Q96HP0 2047 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 TSC2P49815 1807 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 IGKV1D-42A0A075B6H8 117 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 XKRY2A2RUG3 117 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 CDS2O95674 445 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 GNB1P62873 340 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 ALKBH6Q3KRA9 238 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 CCDC144NLQ6NUI1 221 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 CHCHD2Q9Y6H1 151 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-205ENST00000414879 FRMPD3Q5JV73 1810 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 SCN3AQ9NY46 2000 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 KLF4O43474 513 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 TNFSF12O43508 249 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 ICMTO60725 284 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 PDGFAP04085 211 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 KIR3DL2P43630 455 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 MRPS11P82912 194 aaKnown RBP10.45□□□□□ -0.74
PTPRF-205ENST00000414879 IL34Q6ZMJ4 242 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 CXorf67Q86X51 503 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-205ENST00000414879 OR13D1Q8NGV5 346 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 FLVCR1-AS1Q8TAF5 88 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 WDR89Q96FK6 387 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-205ENST00000414879 PUS1Q9Y606 427 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTPRF-205ENST00000414879 HSBP1L1C9JCN9 74 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 MGST3O14880 152 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 CELA2AP08217 269 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 CD37P11049 281 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 PRF1P14222 555 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 ARL16Q0P5N6 197 aa10.45□□□□□ -0.74
PTPRF-205ENST00000414879 OR2B11Q5JQS5 317 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms