RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 NCR3LG1Q68D85 454 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 AWAT2Q6E213 333 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 BATF2Q8N1L9 274 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 BPIFB2Q8N4F0 458 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 Q8NFD4 153 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 OR51T1Q8NGJ9 327 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 ZNF418Q8TF45 676 aaPredicted RBP12.1□□□□□ -0.47
LIMS1-206ENST00000414829 TMEM203Q969S6 136 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 JMJD8Q96S16 334 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 CST11Q9H112 138 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 METTL8Q9H825 291 aaKnown RBP12.1□□□□□ -0.47
LIMS1-206ENST00000414829 SPACA1Q9HBV2 294 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 MRPS28Q9Y2Q9 187 aaKnown RBP12.1□□□□□ -0.47
LIMS1-206ENST00000414829 A0A087WXM4 84 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 hADV38S2A0JD32 116 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 F8VVB4 439 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 F8VWA3 439 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 PIN1P1O15428 100 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 OR2H2O95918 312 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 CSN2P05814 226 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 MYL9P24844 172 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 CEBPDP49716 269 aaPredicted RBP12.09□□□□□ -0.47
LIMS1-206ENST00000414829 RPS25P62851 125 aaKnown RBP12.09□□□□□ -0.47
LIMS1-206ENST00000414829 MEF2CQ06413 473 aaPredicted RBP12.09□□□□□ -0.47
LIMS1-206ENST00000414829 GRK1Q15835 563 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 MPV17LQ2QL34 196 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
LIMS1-206ENST00000414829 FAM185AQ8N0U4 392 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 OSR2Q8N2R0 312 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 PCGF1Q9BSM1 259 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 SUCNR1Q9BXA5 334 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 ING4Q9UNL4 249 aa12.09□□□□□ -0.47
LIMS1-206ENST00000414829 TRAV40A0A0B4J280 105 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 PDCD5O14737 125 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 DEGS1O15121 323 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 HTR3BO95264 441 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 AVPP01185 164 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 RBP4P02753 201 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 LMO1P25800 156 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 ERP29P30040 261 aaKnown RBP12.08□□□□□ -0.48
LIMS1-206ENST00000414829 SNU13P55769 128 aaKnown RBP12.08□□□□□ -0.48
LIMS1-206ENST00000414829 EDDM3BP56851 147 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 RBM11P57052 281 aaKnown RBP12.08□□□□□ -0.48
LIMS1-206ENST00000414829 SLC22A6Q4U2R8 563 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 CRIP3Q6Q6R5 217 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 CD200R1LQ6Q8B3 271 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 METAP1DQ6UB28 335 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-206ENST00000414829 RBMS3Q6XE24 437 aaKnown RBP12.08□□□□□ -0.48
LIMS1-206ENST00000414829 USP43Q70EL4 1123 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 OR6M1Q8NGM8 313 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 MUL1Q969V5 352 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 ORAI1Q96D31 301 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 MS4A7Q9GZW8 240 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-206ENST00000414829 SIRPDQ9H106 197 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 IFT22Q9H7X7 185 aa12.08□□□□□ -0.48
LIMS1-206ENST00000414829 UNKLQ9H9P5 680 aaKnown RBP12.08□□□□□ -0.48
LIMS1-206ENST00000414829 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.48
LIMS1-206ENST00000414829 TRDV1A0A1B0GX56 115 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 MAGEA13PA6NCF6 341 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A10PA6NDY2 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A18PA6NE21 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A16PA6NEW6 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A20PA6NIJ5 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A8PA6NJQ4 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A7PA6NKC0 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A22PA8MWA6 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A12PA8MX19 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A5PA8MXJ8 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A23PA8MXZ1 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 TCF21O43680 179 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FCN3O75636 299 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 CDRT1O95170 752 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A15PP0C7V4 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A13PP0C7W8 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A14PP0C7W9 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM90A24PP0C7X0 464 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 MMP9P14780 707 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 SERPINA2P20848 420 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 CALRP27797 417 aaKnown RBP12.07□□□□□ -0.48
LIMS1-206ENST00000414829 P2RX3P56373 397 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 ARF6P62330 175 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 EDDM3AQ14507 147 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 SSX1Q16384 188 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 TIMM50Q3ZCQ8 353 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 FAM27D1Q5T7N8 215 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 GLIPR1L1Q6UWM5 242 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 C17orf107Q6ZR85 190 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 C9orf139Q6ZV77 190 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 ZNF696Q9H7X3 374 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 IL36RNQ9UBH0 155 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 ST3GAL6Q9Y274 331 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
LIMS1-206ENST00000414829 LINC00312Q9Y6C7 94 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 ZFHX3Q15911 3703 aa12.07□□□□□ -0.48
LIMS1-206ENST00000414829 TRAV1-2A0A0B4J238 106 aa12.06□□□□□ -0.48
LIMS1-206ENST00000414829 SIRPB1O00241 398 aa12.06□□□□□ -0.48
LIMS1-206ENST00000414829 OR7C1O76099 320 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-206ENST00000414829 TFF1P04155 84 aa12.06□□□□□ -0.48
LIMS1-206ENST00000414829 DUSP1P28562 367 aa12.06□□□□□ -0.48
LIMS1-206ENST00000414829 FABP5Q01469 135 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms