RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 C6orf52Q5T4I8 152 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 FBXW9Q5XUX1 488 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ANKRD26P1Q6NSI1 321 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 NOXRED1Q6NXP6 359 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 TMEM220Q6QAJ8 160 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 TBPL2Q6SJ96 375 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 IGFL1Q6UW32 110 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 NTM-AS1Q6ZSK4 140 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 Q6ZSR3 168 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 BHLHA15Q7RTS1 189 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 COMMD6Q7Z4G1 85 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 GALNT10Q86SR1 603 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 WDR86Q86TI4 376 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 OAFQ86UD1 273 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 SPATA24Q86W54 205 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 MICU2Q8IYU8 434 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 HS3ST5Q8IZT8 346 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 LYPD1Q8N2G4 141 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 EID2Q8N6I1 236 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR9K2Q8NGE7 335 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR8J2Q8NGG1 315 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 CXorf40AQ8TE69 158 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ABHD3Q8WU67 409 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ASZ1Q8WWH4 475 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF681Q96N22 645 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 SERPINI1Q99574 410 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 CIB1Q99828 191 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 HOPXQ9BPY8 73 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC25A2Q9BXI2 301 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ANKRD60Q9BZ19 345 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 GABARAPL1Q9H0R8 117 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR2AG1Q9H205 316 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 MRPL40Q9NQ50 206 aaKnown RBP2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 KLHL28Q9NXS3 571 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ADA2Q9NZK5 511 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 TMEM14AQ9Y6G1 99 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 V9GYQ6 96 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 EML6Q6ZMW3 1958 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 MYO9BQ13459 2157 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 SPAG17Q6Q759 2223 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 HEATR5AQ86XA9 2040 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 GABRR3A8MPY1 467 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 H0Y8G0 127 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 PLPP1O14494 284 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 PFDN6O15212 129 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TPST1O60507 370 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 POP7O75817 140 aaKnown RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 SEMA3DO95025 777 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 GABARAPO95166 117 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 SCELO95171 688 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 CLIC3O95833 236 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 SERPINA3P01011 423 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 NPPAP01160 153 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 APODP05090 189 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 BCHEP06276 602 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 ADRA2AP08913 450 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 PABPC4LP0CB38 370 aaKnown RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 IL1RNP18510 177 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 NELFEP18615 380 aaKnown RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 POLR2IP36954 125 aaKnown RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TAGLN2P37802 199 aaKnown RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 GPR1P46091 355 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 CDK9P50750 372 aaKnown RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF138P52744 262 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 PPP1CAP62136 330 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 HBA1P69905 142 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 IRF8Q02556 426 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 ART3Q13508 389 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 SSX2Q16385 188 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 Q6ZS52 159 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 VN1R4Q7Z5H5 301 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 HORMAD1Q86X24 394 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 DHFR2Q86XF0 187 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TRAPPC5Q8IUR0 188 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 OFCC1Q8IZS5 231 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 CBR4Q8N4T8 237 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 PACRGLQ8N7B6 248 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF615Q8N8J6 731 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF709Q8N972 641 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 B3GNT7Q8NFL0 401 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 GPR32P1Q8NGA4 272 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR4D11Q8NGI4 311 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR2A1Q8NGT9 310 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR10J6PQ8NGY7 276 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR10A6Q8NH74 314 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR5K2Q8NHB8 316 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCL4L1Q8NHW4 92 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 KLK6Q92876 244 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TMBIM1Q969X1 311 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 CIDECQ96AQ7 238 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TMEM159Q96B96 161 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TAMM41Q96BW9 452 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF578Q96N58 590 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR52E6Q96RD3 313 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 PITX2Q99697 317 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 CENPKQ9BS16 269 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 TIMM29Q9BSF4 260 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 EFCAB11Q9BUY7 163 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 DPY30Q9C005 99 aa2.09□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR51B5Q9H339 312 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms