RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 DYNLT3P51808 116 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 RAET1LQ5VY80 246 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 FBXO46Q6PJ61 603 aaPredicted RBP12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 SLC16A14Q7RTX9 510 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 ODF3L1Q8IXM7 274 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 PLPP5Q8NEB5 264 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 SSX3Q99909 188 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 METTL9Q9H1A3 318 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HSF4Q9ULV5 492 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 ST3GAL6Q9Y274 331 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 A0A1B0GV90 55 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 A0A1W2PR80 420 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 ADAM20O43506 726 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 OR7C1O76099 320 aaPredicted RBP12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HOXA5P20719 270 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 UCP2P55851 309 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 ELOBQ15370 118 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HMGN3Q15651 99 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST3H3Q16695 136 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 SLC23A3Q6PIS1 610 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 C17orf82Q86X59 251 aaPredicted RBP12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 PLXDC1Q8IUK5 500 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 OR2C3Q8N628 320 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 GJC3Q8NFK1 279 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 RASL10BQ96S79 203 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 NPIPB13A6NJU9 1138 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 NPIPB4C9JG80 1138 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 TNFSF11O14788 317 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 DUX1O43812 170 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BKO60814 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HLA-HP01893 362 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BJP06899 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 B4GALT1P15291 398 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BOP23527 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BBP33778 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 FGF8P55075 233 aaPredicted RBP12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BDP58876 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BCP62807 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST2H2BEQ16778 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 ZNF429Q86V71 674 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 PIGCQ92535 297 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BHQ93079 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 ALKBH3Q96Q83 286 aaPredicted RBP12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BNQ99877 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 HIST1H2BMQ99879 126 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 ZNF442Q9H7R0 627 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 CRIM1Q9NZV1 1036 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 R4GN57 208 aa12.62□□□□□ -0.39
SEMA3F-202ENST00000413852 ZFHX4Q86UP3 3567 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 AFF3P51826 1226 aaKnown RBP12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 STARD6P59095 220 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 RHEBQ15382 184 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 CALHM1Q8IU99 346 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 MEGF10Q96KG7 1140 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 PBDC1Q9BVG4 233 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 C8orf33Q9H7E9 229 aaPredicted RBP12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 EXPH5Q8NEV8 1989 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 TERTO14746 1132 aaKnown RBP12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 PIAS2O75928 621 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 IGLV3-1P01715 115 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 MMP9P14780 707 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 GAMTQ14353 236 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 C9orf135Q5VTT2 229 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 UBALD1Q8TB05 177 aa12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
SEMA3F-202ENST00000413852 ZNF587BE7ETH6 402 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 SRP19P09132 144 aaKnown RBP12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 CCL2P13500 99 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 FABP4P15090 132 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 LMO1P25800 156 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 CD27P26842 260 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 GNMTQ14749 295 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 ICAM4Q14773 271 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 DMRTC2Q8IXT2 367 aaPredicted RBP12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 S100PBPQ96BU1 408 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 ULBP2Q9BZM5 246 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 VSIRQ9H7M9 311 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 CALHM2Q9HA72 323 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 SLC7A10Q9NS82 523 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 IGKV1D-13A0A0B4J2D9 117 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 RRP8O43159 456 aaKnown RBP12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 F10P00742 488 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 HNRNPKP61978 463 aaKnown RBP eCLIP12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 LGI3Q8N145 548 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 OR4D5Q8NGN0 318 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 TGIF2Q9GZN2 237 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 UBE2J1Q9Y385 318 aaPredicted RBP12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 DOCK7Q96N67 2140 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 NPIPA2E9PIF3 369 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 NPIPA3F8WFD2 350 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 DHHO43323 396 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 SLC34A2O95436 690 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 SCTP09683 121 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 MPV17LQ2QL34 196 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 ZNF880Q6PDB4 577 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms