RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 DUSP1P28562 367 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 SLC6A1P30531 599 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 RBMXP38159 391 aaKnown RBP5.6□□□□□ -1.51
VPS41-204ENST00000413141 PMELP40967 661 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 CBX5P45973 191 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 PPOXP50336 477 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 TAS2R19P59542 299 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 CCL8P80075 99 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 SRSF1Q07955 248 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS41-204ENST00000413141 ARFRP1Q13795 201 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 SWI5Q1ZZU3 235 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 ATAD3CQ5T2N8 411 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 FAAP20Q6NZ36 180 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 Q6P435 159 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 BRICD5Q6PL45 260 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 MEX3BQ6ZN04 569 aaKnown RBP5.6□□□□□ -1.51
VPS41-204ENST00000413141 Q6ZNX1 250 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 GVQW1Q8N7I0 195 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 TMEM229BQ8NBD8 167 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 SUMF2Q8NBJ7 301 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 OR4C16Q8NGL9 310 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 ENKURQ8TC29 256 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 SNAPC3Q92966 411 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 ERGIC1Q969X5 290 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 OCSTAMPQ9BR26 566 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 HDHD3Q9BSH5 251 aaPredicted RBP5.6□□□□□ -1.51
VPS41-204ENST00000413141 FAAP24Q9BTP7 215 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 SAP30LQ9HAJ7 183 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 SPACA1Q9HBV2 294 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 HRASLSQ9HDD0 168 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 GCM1Q9NP62 436 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 C12orf4Q9NQ89 552 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 ZNF701Q9NV72 531 aaPredicted RBP5.6□□□□□ -1.51
VPS41-204ENST00000413141 RASL12Q9NYN1 266 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 RALYQ9UKM9 306 aaKnown RBP5.6□□□□□ -1.51
VPS41-204ENST00000413141 NPTNQ9Y639 398 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 CHD3Q12873 2000 aaKnown RBP5.6□□□□□ -1.51
VPS41-204ENST00000413141 USP9XQ93008 2570 aaPredicted RBP5.6□□□□□ -1.51
VPS41-204ENST00000413141 FLNCQ14315 2725 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 TANC2Q9HCD6 1990 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 RAI1Q7Z5J4 1906 aaPredicted RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 UBE2QL1A1L167 161 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 NAP1L6A6NFF2 107 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 ZNF736B4DX44 427 aaPredicted RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 SIRPB1O00241 398 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 SLC33A1O00400 549 aaPredicted RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 HSPB6O14558 160 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 DEGS1O15121 323 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 GOSR1O95249 250 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 HAND1O96004 215 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 LHBP01229 141 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 CD3DP04234 171 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 GLAP06280 429 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 FCGR3AP08637 254 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 AKAIN1P0CW23 69 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 NAT1P18440 290 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 TBPP20226 339 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 DTYMKP23919 212 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 HLA-DMAP28067 261 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 CD80P33681 288 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 FAUP35544 74 aaKnown RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 CEBPDP49716 269 aaPredicted RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 MRPS15P82914 257 aaKnown RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 PLA1AQ53H76 456 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 SHEQ5VZ18 495 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 OR52W1Q6IF63 320 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 C11orf71Q6IPW1 123 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 STEAP1BQ6NZ63 245 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 CCBE1Q6UXH8 406 aaPredicted RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 Q6ZPA2 131 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 GLCCI1Q86VQ1 547 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 HOGA1Q86XE5 327 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A1Q86YD7 464 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 ZCCHC24Q8N2G6 241 aaKnown RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 OR4S1Q8NGB4 309 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 OR4D10Q8NGI6 311 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 OR11L1Q8NGX0 322 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 MAFIPQ8WZ33 124 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 HPS1Q92902 700 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 UPRTQ96BW1 309 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 CMSS1Q9BQ75 279 aaKnown RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 DPCDQ9BVM2 203 aaPredicted RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 EGLN1Q9GZT9 426 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 CHST6Q9GZX3 395 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 MS4A5Q9H3V2 200 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 CBLN4Q9NTU7 201 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 DECR2Q9NUI1 292 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 FAIMQ9NVQ4 179 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 NLKQ9UBE8 527 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 RNF7Q9UBF6 113 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 DNAJB11Q9UBS4 358 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 OR14J1Q9UGF5 321 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 ZNF230Q9UIE0 474 aaPredicted RBP5.59□□□□□ -1.51
VPS41-204ENST00000413141 PPP1R3CQ9UQK1 317 aa5.59□□□□□ -1.51
VPS41-204ENST00000413141 MYO18BQ8IUG5 2567 aa5.59□□□□□ -1.52
VPS41-204ENST00000413141 HRNRQ86YZ3 2850 aaPredicted RBP5.58□□□□□ -1.52
VPS41-204ENST00000413141 CHD6Q8TD26 2715 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 hCG_2014768A0A024R1R8 64 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 IGKV1D-17A0A075B6S4 117 aa5.58□□□□□ -1.52
VPS41-204ENST00000413141 FAM240BA0A1B0GVZ2 78 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms