RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 FIP1L1Q6UN15 594 aaKnown RBP10.82□□□□□ -0.68
HDAC8-210ENST00000412342 C9orf139Q6ZV77 190 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 CEACAM19Q7Z692 300 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 SVOPQ8N4V2 548 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 C11orf42Q8N5U0 333 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 NKAIN3Q8N8D7 197 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 ASCC1Q8N9N2 400 aaKnown RBP10.82□□□□□ -0.68
HDAC8-210ENST00000412342 OR4S1Q8NGB4 309 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 OR4D6Q8NGJ1 314 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 PHYHIPQ92561 330 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 TNFRSF14Q92956 283 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 PCGF1Q9BSM1 259 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 FAM192AQ9GZU8 254 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 EXOSC4Q9NPD3 245 aaKnown RBP10.82□□□□□ -0.68
HDAC8-210ENST00000412342 NDUFB11Q9NX14 153 aa10.82□□□□□ -0.68
HDAC8-210ENST00000412342 SOX21Q9Y651 276 aaPredicted RBP10.82□□□□□ -0.68
HDAC8-210ENST00000412342 IGHV3OR16-10A0A075B7F0 116 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 CENPVL3A0A0U1RRI6 287 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 A0A1W2PP11 408 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 M0R1W7 72 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 SIRPB1O00241 398 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 RGS9O75916 674 aaPredicted RBP10.81□□□□□ -0.68
HDAC8-210ENST00000412342 IFNA2P01563 188 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 BMXP51813 675 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 DLX6P56179 175 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 ZNF273Q14593 569 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 IL13RA2Q14627 380 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 HSD17B12Q53GQ0 312 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 TMEM200BQ69YZ2 307 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 CD200R1LQ6Q8B3 271 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 C1orf122Q6ZSJ8 110 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 VMO1Q7Z5L0 202 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 BCL6BQ8N143 479 aaPredicted RBP10.81□□□□□ -0.68
HDAC8-210ENST00000412342 OR4M1Q8NGD0 313 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 MUL1Q969V5 352 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 ZNF48Q96MX3 618 aaPredicted RBP10.81□□□□□ -0.68
HDAC8-210ENST00000412342 GFI1Q99684 422 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 SLC6A7Q99884 636 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 CHST6Q9GZX3 395 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 UNKLQ9H9P5 680 aaKnown RBP10.81□□□□□ -0.68
HDAC8-210ENST00000412342 ZNF581Q9P0T4 197 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 ONECUT1Q9UBC0 465 aa10.81□□□□□ -0.68
HDAC8-210ENST00000412342 FBN1P35555 2871 aaKnown RBP10.81□□□□□ -0.68
HDAC8-210ENST00000412342 A0A0G2JK05 382 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 A0A1W2PQ09 198 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 MEGF11A6BM72 1044 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 SLC33A1O00400 549 aaPredicted RBP10.8□□□□□ -0.68
HDAC8-210ENST00000412342 SH2D1BO14796 132 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 HTR3BO95264 441 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 SRMP19623 302 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 DLX1P56177 255 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 RPL31P62899 125 aaKnown RBP10.8□□□□□ -0.68
HDAC8-210ENST00000412342 PDCD1Q15116 288 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 RSU1Q15404 277 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 GRK1Q15835 563 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 PIGYQ3MUY2 71 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 C1orf100Q5SVJ3 147 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 HCP5Q6MZN7 132 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 METAP1DQ6UB28 335 aaPredicted RBP10.8□□□□□ -0.68
HDAC8-210ENST00000412342 FAM185AQ8N0U4 392 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 JAGN1Q8N5M9 183 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 TBC1D15Q8TC07 691 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 C22orf15Q8WYQ4 148 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 UQCC2Q9BRT2 126 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 METTL9Q9H1A3 318 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 SIRT7Q9NRC8 400 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 ING4Q9UNL4 249 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 MRPS28Q9Y2Q9 187 aaKnown RBP10.8□□□□□ -0.68
HDAC8-210ENST00000412342 DNHD1Q96M86 4753 aa10.8□□□□□ -0.68
HDAC8-210ENST00000412342 TRAV24A0A0B4J272 114 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 RNASEK-C17orf49H0YIS7 233 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 MGST3O14880 152 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 CSN2P05814 226 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 ZNF44P15621 663 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 CCL3L1P16619 93 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 GABRR1P24046 479 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 PRTN3P24158 256 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 ERP29P30040 261 aaKnown RBP10.79□□□□□ -0.68
HDAC8-210ENST00000412342 RBM11P57052 281 aaKnown RBP10.79□□□□□ -0.68
HDAC8-210ENST00000412342 SRSF2Q01130 221 aaKnown RBP10.79□□□□□ -0.68
HDAC8-210ENST00000412342 PRB3Q04118 309 aaPredicted RBP10.79□□□□□ -0.68
HDAC8-210ENST00000412342 SCGB2A2Q13296 93 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 RUSC1-AS1Q66K80 236 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 GLIPR1L1Q6UWM5 242 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 BRD3OSQ6XYD6 125 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 USP43Q70EL4 1123 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 GDPD3Q7L5L3 318 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 CMTM4Q8IZR5 234 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 OSR2Q8N2R0 312 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 TPRX1Q8N7U7 411 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 CHST4Q8NCG5 386 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 OR5D13Q8NGL4 314 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 FCGR1BQ92637 280 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 COQ2Q96H96 371 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 IFT22Q9H7X7 185 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 TCF7L1Q9HCS4 588 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 GLS2Q9UI32 602 aa10.79□□□□□ -0.68
HDAC8-210ENST00000412342 IGHV1-69DA0A0B4J2H0 117 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 TRDV1A0A1B0GX56 115 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 SHISA3A0PJX4 238 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms