RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 C16orf72Q14CZ0 275 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 SNRNP35Q16560 246 aaKnown RBP3.21□□□□□ -1.89
BRCA1-204ENST00000412061 FBXL19-AS1Q494R0 122 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 FAM162BQ5T6X4 162 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 TNFAIP8L2Q6P589 184 aaPredicted RBP3.21□□□□□ -1.89
BRCA1-204ENST00000412061 SPNS3Q6ZMD2 512 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 MUC15Q8N387 334 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 DRAM1Q8N682 238 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 C14orf178Q8N769 122 aaPredicted RBP3.21□□□□□ -1.89
BRCA1-204ENST00000412061 DTD1Q8TEA8 209 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 NEURL3Q96EH8 262 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 C16orf74Q96GX8 76 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 MRPL20Q9BYC9 149 aaKnown RBP3.21□□□□□ -1.89
BRCA1-204ENST00000412061 MROQ9BYG7 248 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 OR51I1Q9H343 314 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 MYO15BQ96JP2 1530 aa3.21□□□□□ -1.9
BRCA1-204ENST00000412061 SETD1AO15047 1707 aaKnown RBP3.21□□□□□ -1.9
BRCA1-204ENST00000412061 LOC389332A0A1B0GUA5 103 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 PGPA6NDG6 321 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ZFP92A6NM28 416 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 OR5K4A6NMS3 321 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF705GA8MUZ8 300 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-204ENST00000412061 KRBOX1C9JBD0 128 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 C8orf87E5RJ46 101 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 H0YJX3 145 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CD5LO43866 347 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CA11O75493 328 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CNMDO75829 334 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CNIH1O95406 144 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 OMGP23515 440 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CFL1P23528 166 aaKnown RBP3.2□□□□□ -1.9
BRCA1-204ENST00000412061 DTYMKP23919 212 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CCR7P32248 378 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 NMUP48645 174 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 RIPPLY3P57055 190 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 TAS2R43P59537 309 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 LRRC75BQ2VPJ9 315 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 Q499Y3 187 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ATP6AP1LQ52LC2 224 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 C1orf195Q5TG92 126 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF530Q6P9A1 599 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-204ENST00000412061 FAM131AQ6UXB0 335 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 GID4Q8IVV7 300 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ABCA7Q8IZY2 2146 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 LINC00337Q8N6G1 96 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ABHD3Q8WU67 409 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 PTX4Q96A99 478 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ANKRD9Q96BM1 317 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-204ENST00000412061 MRPL48Q96GC5 212 aaKnown RBP3.2□□□□□ -1.9
BRCA1-204ENST00000412061 C18orf15Q96N68 181 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 OR2M2Q96R28 347 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 SDHCQ99643 169 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-204ENST00000412061 PECRQ9BY49 303 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ULBP1Q9BZM6 244 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CHST5Q9GZS9 411 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 TLNRD1Q9H1K6 362 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 VSIRQ9H7M9 311 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 TMEM9Q9P0T7 183 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 INSIG2Q9Y5U4 225 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ANKRD30AQ9BXX3 1397 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CHD2O14647 1828 aaKnown RBP3.2□□□□□ -1.9
BRCA1-204ENST00000412061 MIA3Q5JRA6 1907 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 ZNFX1Q9P2E3 1918 aaKnown RBP3.2□□□□□ -1.9
BRCA1-204ENST00000412061 SCN2AQ99250 2005 aa3.2□□□□□ -1.9
BRCA1-204ENST00000412061 CCL15-CCL14A0A0B4J2E2 113 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SMIM9A6NGZ8 99 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 BCL2L11O43521 198 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CIAO1O76071 339 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR4E1P0C645 316 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 GABRA1P14867 456 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 MYL12AP19105 171 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 IL3RAP26951 378 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CXCL5P42830 114 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CBX5P45973 191 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SULT1A1P50225 295 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SULT1A2P50226 295 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PFN3P60673 137 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 GRB2P62993 217 aaKnown RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ERCC8Q13216 396 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR2F1Q13607 317 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SLC9A3R2Q15599 337 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CCL15Q16663 113 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 GALNT10Q86SR1 603 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF645Q8N7E2 425 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PXT1Q8NFP0 134 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR10G4Q8NGN3 311 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR1J4Q8NGS1 313 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR6K3Q8NGY3 331 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR52P1PQ8NH57 321 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ASB17Q8WXJ9 295 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 TM4SF18Q96CE8 201 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 FXYD5Q96DB9 178 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 IMP4Q96G21 291 aaKnown RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ZIM3Q96PE6 472 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 LINC01587Q99440 93 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SLC17A9Q9BYT1 436 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CDC42EP4Q9H3Q1 356 aaKnown RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ASB7Q9H672 318 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 VNN3Q9NY84 501 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms