RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 MAP2K4P45985 399 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 BLMHQ13867 455 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 INSL4Q14641 139 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 ELP2Q6IA86 826 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 METAP1DQ6UB28 335 aaPredicted RBP13.39□□□□□ -0.27
NOD1-202ENST00000411552 GDPD3Q7L5L3 318 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 ZDHHC22Q8N966 263 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 OR5D13Q8NGL4 314 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 TNFRSF14Q92956 283 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 TMED9Q9BVK6 235 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 CHST6Q9GZX3 395 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 METTL8Q9H825 291 aaKnown RBP13.39□□□□□ -0.27
NOD1-202ENST00000411552 EXOSC4Q9NPD3 245 aaKnown RBP13.39□□□□□ -0.27
NOD1-202ENST00000411552 NOX4Q9NPH5 578 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 BLOC1S6Q9UL45 172 aa13.39□□□□□ -0.27
NOD1-202ENST00000411552 RNASEK-C17orf49H0YIS7 233 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 DENRO43583 198 aaKnown RBP13.38□□□□□ -0.27
NOD1-202ENST00000411552 CDRT1O95170 752 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 HSMCR30P0CW71 290 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 PRTN3P24158 256 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 OR3A1P47881 315 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 MTNR1BP49286 362 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 EDDM3BP56851 147 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 KLRD1Q13241 179 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 GPR50Q13585 617 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 EDDM3AQ14507 147 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 ZNF273Q14593 569 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 RSU1Q15404 277 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 GRK1Q15835 563 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 DEFB112Q30KQ8 113 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 LIPKQ5VXJ0 399 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 Q6P435 159 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 ASCL4Q6XD76 172 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 MS4A15Q8N5U1 240 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 OR4S1Q8NGB4 309 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 OR10K1Q8NGX5 313 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 TBC1D15Q8TC07 691 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 THRSPQ92748 146 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 C1orf147Q96MC9 270 aaPredicted RBP13.38□□□□□ -0.27
NOD1-202ENST00000411552 Q9H521 79 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 UNKLQ9H9P5 680 aaKnown RBP13.38□□□□□ -0.27
NOD1-202ENST00000411552 FOXJ3Q9UPW0 622 aa13.38□□□□□ -0.27
NOD1-202ENST00000411552 A0A1W2PPH5 198 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 MEX3AA1L020 520 aaKnown RBP13.37□□□□□ -0.27
NOD1-202ENST00000411552 DNAJC9-AS1A6NH13 148 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 MAS1P04201 325 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 CCL3L1P16619 93 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 LMO1P25800 156 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 MAPK3P27361 379 aaPredicted RBP13.37□□□□□ -0.27
NOD1-202ENST00000411552 BMXP51813 675 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 SCN1BQ07699 218 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 BAMBIQ13145 260 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 ACSM3Q53FZ2 586 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 NCR3LG1Q68D85 454 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 UNQ9370/PRO34162Q6UXP9 181 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.37□□□□□ -0.27
NOD1-202ENST00000411552 Q8NFD4 153 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 ZFAND2BQ8WV99 257 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 UFD1Q92890 307 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 DUX5Q96PT3 197 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 NR1H4Q96RI1 486 aaPredicted RBP13.37□□□□□ -0.27
NOD1-202ENST00000411552 ING4Q9UNL4 249 aa13.37□□□□□ -0.27
NOD1-202ENST00000411552 KIAA2026Q5HYC2 2103 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 A0A0G2JK05 382 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 TRIM77I1YAP6 450 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 MGST3O14880 152 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 HTR3BO95264 441 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 ZNF44P15621 663 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 GP2P55259 537 aaKnown RBP13.36□□□□□ -0.27
NOD1-202ENST00000411552 DLX6P56179 175 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 UBA52P62987 128 aaKnown RBP13.36□□□□□ -0.27
NOD1-202ENST00000411552 GUCA2AQ02747 115 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 MLLT11Q13015 90 aaPredicted RBP13.36□□□□□ -0.27
NOD1-202ENST00000411552 TPBGQ13641 420 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 PIGYQ3MUY2 71 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 FAM27D1Q5T7N8 215 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 TCF23Q7RTU1 214 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 PNKDQ8N490 385 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 C11orf42Q8N5U0 333 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 TPRX1Q8N7U7 411 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 OR51T1Q8NGJ9 327 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 PPP1R35Q8TAP8 253 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 METTL9Q9H1A3 318 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 PPA2Q9H2U2 334 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 PRDM13Q9H4Q3 707 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 ISYNA1Q9NPH2 558 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 IL36GQ9NZH8 169 aa13.36□□□□□ -0.27
NOD1-202ENST00000411552 A0A0U1RQK1 487 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 A0A1W2PRD5 423 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 A0A1W2PRF3 423 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 A0A1W2PRM7 423 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 SLC33A1O00400 549 aaPredicted RBP13.35□□□□□ -0.27
NOD1-202ENST00000411552 DEGS1O15121 323 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 NPFFO15130 113 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 SC5DO75845 299 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 ZNF728P0DKX0 622 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 CPEP16870 476 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 ERVFRD-1P60508 538 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 GABARAPL2P60520 117 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 MEF2CQ06413 473 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms