RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 DNAJC9Q8WXX5 260 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TBX5Q99593 518 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CHST5Q9GZS9 411 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TENM3Q9P273 2699 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TRBV2A0A0J9YWF9 115 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 M0QZK8 103 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ENTPD6O75354 484 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CYB5AP00167 134 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 HOXB6P17509 224 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CALB2P22676 271 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GDNFP39905 211 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 POU3F4P49335 361 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 THBS3P49746 956 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 RBP2P50120 134 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 DAPP51397 102 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GYS2P54840 703 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 KPNB1Q14974 876 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ZNF146Q15072 292 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 SPIN3Q5JUX0 258 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TPTE2P1Q5T6R2 138 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 AADACL4Q5VUY2 407 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 NXNL2Q5VZ03 156 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ZNF329Q86UD4 541 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CREB3L1Q96BA8 519 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 THTPAQ9BU02 230 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 MCRIP2Q9BUT9 160 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PRRG3Q9BZD7 231 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ZNF286AQ9HBT8 521 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PCDHGB5Q9Y5G0 923 aa11.31□□□□□ -0.6
HLA-DQB2-229ENST00000411527 FUOMA2VDF0 154 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 SH2D1BO14796 132 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 T-ENOLP0DO92 83 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 MNDAP41218 407 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GLIPR1P48060 266 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PRRX1P54821 245 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 MTCP1P56278 107 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CDC42P60953 191 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 RPL23AP62750 156 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 EFNB1P98172 346 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 AESQ08117 197 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 DCTN2Q13561 401 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 RBM39Q14498 530 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 HLA-DRB5Q30154 266 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 UNQ9370/PRO34162Q6UXP9 181 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 RNF144BQ7Z419 303 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CCDC54Q8NEL0 328 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TMEM163Q8TC26 289 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CORO2AQ92828 525 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 IL4I1Q96RQ9 567 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 EXOSC4Q9NPD3 245 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TAS2R3Q9NYW6 316 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GSTK1Q9Y2Q3 226 aa11.3□□□□□ -0.6
HLA-DQB2-229ENST00000411527 METTL15A6NJ78 407 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 NUDT19A8MXV4 375 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 LY6LH3BQJ8 138 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 FKBP6O75344 327 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OR2H2O95918 312 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 FAM107AO95990 144 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 FAM106CPP0CH98 169 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CD34P28906 385 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OR3A4PP47883 348 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CCDC144NLQ6NUI1 221 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 FAHD1Q6P587 224 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 C18orf65Q6ZTR6 163 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 SPATA24Q86W54 205 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 RDH10Q8IZV5 341 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PRSS35Q8N3Z0 413 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 DNAAF1Q8NEP3 725 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OR4D6Q8NGJ1 314 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PP6455Q8WZ26 134 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 C10orf35Q96D05 121 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 NRBF2Q96F24 287 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 HMG20AQ9NP66 347 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ING3Q9NXR8 418 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 MOB4Q9Y3A3 225 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 HSPE1-MOB4S4R3N1 261 aa11.29□□□□□ -0.6
HLA-DQB2-229ENST00000411527 IGKV1-9A0A0C4DH69 117 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 LOC107986453A0A1B0GWG9 222 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 A0A1W2PQL4 384 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OOSP1A8MZH6 123 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 MITFO75030 526 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OR2T7P0C7T2 308 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 EPHA2P29317 976 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 MYCNOSP40205 109 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PTGFRP43088 359 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 DGCR2P98153 550 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 SCN1BQ07699 218 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PDZK1IP1Q13113 114 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 UTF1Q5T230 341 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OR2W3Q7Z3T1 314 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GID4Q8IVV7 300 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CHPT1Q8WUD6 406 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ADAT3Q96EY9 351 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 NOL4LQ96MY1 436 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ZFP57Q9NU63 452 aa11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ZMAT5Q9UDW3 170 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ODAMA1E959 279 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ATP8B1O43520 1251 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms