RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 DUSP1P28562 367 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 ALDH3A2P51648 485 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 ARHGDIBP52566 201 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 SLC34A1Q06495 639 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 CCBE1Q6UXH8 406 aaPredicted RBP11.89□□□□□ -0.51
CBX3-203ENST00000409747 OR4S1Q8NGB4 309 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 SERTAD4Q9NUC0 356 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 MEGF11A6BM72 1044 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 J3QLW9 94 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 ZNF19P17023 458 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 HTR1DP28221 377 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 OR3A1P47881 315 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 SNU13P55769 128 aaKnown RBP11.88□□□□□ -0.51
CBX3-203ENST00000409747 NANOS3P60323 173 aaKnown RBP11.88□□□□□ -0.51
CBX3-203ENST00000409747 EMX1Q04741 257 aaPredicted RBP11.88□□□□□ -0.51
CBX3-203ENST00000409747 LDLRAD2Q5SZI1 272 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 RTN4RL2Q86UN3 420 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 SAXO1Q8IYX7 474 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 ZNF596Q8TC21 504 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 C4orf36Q96KX1 117 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 EXOGQ9Y2C4 368 aaKnown RBP11.88□□□□□ -0.51
CBX3-203ENST00000409747 GSTK1Q9Y2Q3 226 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 HILPDAQ9Y5L2 63 aa11.88□□□□□ -0.51
CBX3-203ENST00000409747 SIRPB1O00241 398 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 MPZL2O60487 215 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 KDM4BO94953 1096 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 OR2H2O95918 312 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 MRPL28Q13084 256 aaKnown RBP11.87□□□□□ -0.51
CBX3-203ENST00000409747 ALKBH1Q13686 389 aaKnown RBP11.87□□□□□ -0.51
CBX3-203ENST00000409747 C16orf82Q7Z2V1 217 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 C10orf67Q8IYJ2 551 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 SYS1Q8N2H4 156 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 CHST4Q8NCG5 386 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 OR13C9Q8NGT0 318 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 RFT1Q96AA3 541 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 PELI1Q96FA3 418 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
CBX3-203ENST00000409747 AKR1E2Q96JD6 320 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 COMMD4Q9H0A8 199 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 TAS2R3Q9NYW6 316 aa11.87□□□□□ -0.51
CBX3-203ENST00000409747 XPNPEP2O43895 674 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 CSN2P05814 226 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 ZNF44P15621 663 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
CBX3-203ENST00000409747 HABP2Q14520 560 aaPredicted RBP11.86□□□□□ -0.51
CBX3-203ENST00000409747 ZIK1Q3SY52 487 aaPredicted RBP11.86□□□□□ -0.51
CBX3-203ENST00000409747 HEPN1Q6WQI6 88 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 NDUFA11Q86Y39 141 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 OR4F17Q8NGA8 305 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 OR51A4Q8NGJ6 313 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 HAVCR2Q8TDQ0 301 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 CREB3L1Q96BA8 519 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 Q96MT0 163 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 OR4F4Q96R69 305 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 ALG8Q9BVK2 526 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 ZCCHC4Q9H5U6 513 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 INPP5EQ9NRR6 644 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 GMPPBQ9Y5P6 360 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 OR4C45A6NMZ5 311 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 HCKP08631 526 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 CALCBP10092 127 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 DBTP11182 482 aaKnown RBP11.86□□□□□ -0.51
CBX3-203ENST00000409747 LMO1P25800 156 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 BRS3P32247 399 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 GALEQ14376 348 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 NSUN5P1Q3KNT7 163 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 ABHD12Q8N2K0 398 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 OR5D18Q8NGL1 313 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 OR5D14Q8NGL3 314 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 OR4P4Q8NGL7 312 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 CAPSLQ8WWF8 208 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 CORO2AQ92828 525 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 LGALS12Q96DT0 336 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 WNT10AQ9GZT5 417 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.86□□□□□ -0.51
CBX3-203ENST00000409747 DPM3Q9P2X0 92 aa11.86□□□□□ -0.51
CBX3-203ENST00000409747 IGKV1-12A0A0C4DH73 117 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 TMEM212A6NML5 194 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 FAM90A22PA8MWA6 464 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 E9PQ18 207 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 G3V4G9 280 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 H3BNX3 289 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 ALX3O95076 343 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 FADS2O95864 444 aaKnown RBP11.85□□□□□ -0.51
CBX3-203ENST00000409747 IGKV1D-12P01611 117 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 CCDC159P0C7I6 412 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 CDK2P24941 298 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 CEACAM3P40198 252 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 PTGFRP43088 359 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 BDH1Q02338 343 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 KPNB1Q14974 876 aaKnown RBP11.85□□□□□ -0.51
CBX3-203ENST00000409747 BEAN1Q3B7T3 259 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 SAMD5Q5TGI4 173 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 PRAMEF5Q5TYX0 476 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 REC114Q7Z4M0 266 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 SERPINA12Q8IW75 414 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 CBR4Q8N4T8 237 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 OR10AC1Q8NH08 325 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 SPACA5Q96QH8 159 aa11.85□□□□□ -0.51
CBX3-203ENST00000409747 C9orf16Q9BUW7 83 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms