RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CCDC74BQ96LY2 380 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 TCFL5Q9UL49 500 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 WSB1Q9Y6I7 421 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 WDFY3Q8IZQ1 3526 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 IGKV3D-11A0A0A0MRZ8 115 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 GABRR1P24046 479 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 ASCL1P50553 236 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 ZNF133P52736 654 aaPredicted RBP13.46□□□□□ -0.26
LIMS2-205ENST00000409455 FOXL2P58012 376 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 TMEM176BQ3YBM2 270 aaPredicted RBP13.46□□□□□ -0.26
LIMS2-205ENST00000409455 THEM4Q5T1C6 240 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 SPSB3Q6PJ21 355 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 LIAT1Q6ZQX7 453 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 BOD1Q96IK1 185 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 WWTR1Q9GZV5 400 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 NECAP2Q9NVZ3 263 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 COPS7AQ9UBW8 275 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 PISDQ9UG56 409 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 GPR179Q6PRD1 2367 aa13.46□□□□□ -0.26
LIMS2-205ENST00000409455 ZNF850A8MQ14 1090 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 SCAF4O95104 1147 aaKnown RBP13.45□□□□□ -0.26
LIMS2-205ENST00000409455 ATP6V0CP27449 155 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 CLRN1P58418 232 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 RAB4BP61018 213 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 NSDHLQ15738 373 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 RHBDD2Q6NTF9 364 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 LGI3Q8N145 548 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 ZNF283Q8N7M2 679 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 C18orf12Q96KH6 178 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 FAM210BQ96KR6 192 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-205ENST00000409455 HSPA12AO43301 675 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 TGOLN2O43493 480 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 EIF3IQ13347 325 aaKnown RBP13.45□□□□□ -0.26
LIMS2-205ENST00000409455 TSPO2Q5TGU0 170 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 SHISA6Q6ZSJ9 500 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 DPPA2Q7Z7J5 298 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 FRZBQ92765 325 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 ARRDC1-AS1Q9H2J1 176 aa13.45□□□□□ -0.26
LIMS2-205ENST00000409455 B4DEV8 164 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 FXYD4P59646 89 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 ICAM4Q14773 271 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 USF2Q15853 346 aaPredicted RBP13.44□□□□□ -0.26
LIMS2-205ENST00000409455 SLC16A14Q7RTX9 510 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 FBXL14Q8N1E6 418 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 PLPP5Q8NEB5 264 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 OR5L1Q8NGL2 311 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 DDIT4LQ96D03 193 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 MISP3Q96FF7 219 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 ABHD14AQ9BUJ0 271 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 VN1R1Q9GZP7 353 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 FOXD3Q9UJU5 478 aaPredicted RBP13.44□□□□□ -0.26
LIMS2-205ENST00000409455 NXT1Q9UKK6 140 aaKnown RBP13.44□□□□□ -0.26
LIMS2-205ENST00000409455 RER1O15258 196 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 ANOS1P23352 680 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 IL2RGP31785 369 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 CDAP32320 146 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 CHAF1BQ13112 559 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 PHLDA2Q53GA4 152 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 ZNF506Q5JVG8 444 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 ABHD5Q8WTS1 349 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 ST8SIA1Q92185 356 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 HIST1H2BLQ99880 126 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 SLC25A31Q9H0C2 315 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 LIME1Q9H400 295 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 SLC2A9Q9NRM0 540 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 SERINC1Q9NRX5 453 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 KLHL13Q9P2N7 655 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 TP53TG5Q9Y2B4 290 aa13.44□□□□□ -0.26
LIMS2-205ENST00000409455 CCDC187A0A096LP49 1063 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 MKRN2OSH3BPM6 223 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 PITX3O75364 302 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 QDPRP09417 244 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 GLI4P10075 376 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 FCGR2AP12318 317 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 PAX1P15863 534 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 MPLP40238 635 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 CSNK1A1P48729 337 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 HLA-DRB3P79483 266 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 FOXO1Q12778 655 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 RBMXL1Q96E39 390 aaKnown RBP13.43□□□□□ -0.26
LIMS2-205ENST00000409455 RARRES3Q9UL19 164 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 HSF4Q9ULV5 492 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 B3GALT1Q9Y5Z6 326 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 FER1L5A0AVI2 2057 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 CFAP54Q96N23 3096 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 A0A087WZY1 265 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 GDF9O60383 454 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 SCRG1O75711 98 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 BTF3P20290 206 aaKnown RBP13.43□□□□□ -0.26
LIMS2-205ENST00000409455 FGF7P21781 194 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 C4orf17Q53FE4 359 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
LIMS2-205ENST00000409455 NOXO1Q8NFA2 376 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 SYT3Q9BQG1 590 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 MRPL13Q9BYD1 178 aaKnown RBP13.43□□□□□ -0.26
LIMS2-205ENST00000409455 CRLF2Q9HC73 371 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 OCIAD1Q9NX40 245 aa13.43□□□□□ -0.26
LIMS2-205ENST00000409455 ALKBH4Q9NXW9 302 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms