RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RPEQ96AT9 228 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 GLS2Q9UI32 602 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 COPS3Q9UNS2 423 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 SAMHD1Q9Y3Z3 626 aaKnown RBP13.08□□□□□ -0.32
CHMP3-203ENST00000409225 A0A1B0GTI1 187 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 LOC110117498-PIK3R3F6TDL0 507 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 SIRPB1O00241 398 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 FGF16O43320 207 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 ZNF254O75437 659 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 GINS1Q14691 196 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 PNLIPRP3Q17RR3 467 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 CXorf66Q5JRM2 361 aaPredicted RBP13.07□□□□□ -0.32
CHMP3-203ENST00000409225 ENTHD1Q8IYW4 607 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 DRAM1Q8N682 238 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 OR10G2Q8NGC3 310 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 REEP1Q9H902 201 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 RBFOX1Q9NWB1 397 aaKnown RBP13.07□□□□□ -0.32
CHMP3-203ENST00000409225 TAS2R3Q9NYW6 316 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 KIAA2026Q5HYC2 2103 aa13.07□□□□□ -0.32
CHMP3-203ENST00000409225 H3BSH0 61 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 SRSF10O75494 262 aaKnown RBP13.06□□□□□ -0.32
CHMP3-203ENST00000409225 FRMD6-AS1P0C7T7 363 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 SLC2A5P22732 501 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 MAGEA2P43356 314 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 GLIPR1P48060 266 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 ROM1Q03395 351 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 APOFQ13790 326 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 CD300LDQ6UXZ3 194 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 CYP2R1Q6VVX0 501 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 ELMOD2Q8IZ81 293 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 FAM58AQ8N1B3 248 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 OR4D6Q8NGJ1 314 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 SEBOXQ9HB31 216 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-203ENST00000409225 PCDHB16Q9NRJ7 776 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 ING3Q9NXR8 418 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 OR52A1Q9UKL2 312 aa13.06□□□□□ -0.32
CHMP3-203ENST00000409225 SIRT4Q9Y6E7 314 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-203ENST00000409225 MAGEB4O15481 346 aaPredicted RBP13.05□□□□□ -0.32
CHMP3-203ENST00000409225 PRKACAP17612 351 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 BCL3P20749 454 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 NFYBP25208 207 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 PTGFRP43088 359 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 CDX1P47902 265 aaPredicted RBP13.05□□□□□ -0.32
CHMP3-203ENST00000409225 NPBWR2P48146 333 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 AESQ08117 197 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 GPR50Q13585 617 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 UBE2V2Q15819 145 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 PLEKHG7Q6ZR37 379 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 HDXQ7Z353 690 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 Q8IYB0 196 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 ASB17Q8WXJ9 295 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 CORO2AQ92828 525 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 FEVQ99581 238 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 APOL4Q9BPW4 351 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 MOB1AQ9H8S9 216 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 PLEKHA1Q9HB21 404 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 NKX1-2Q9UD57 310 aaPredicted RBP13.05□□□□□ -0.32
CHMP3-203ENST00000409225 R4GMQ9 66 aa13.05□□□□□ -0.32
CHMP3-203ENST00000409225 A0A1W2PPI3 338 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 FUOMA2VDF0 154 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 DHRS7CA6NNS2 312 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 AP4M1O00189 453 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 ENTPD6O75354 484 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 IGKV1D-33P01593 117 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 IGKV1-33P01594 117 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 FUT6P51993 359 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 FOXE3Q13461 319 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 DIAPH2-AS1Q14236 149 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 ODF4Q2M2E3 257 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 FAM27D1Q5T7N8 215 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 OR2T5Q6IEZ7 315 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 OR2T29Q8NH02 315 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 OR9G1Q8NH87 305 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 ISOC1Q96CN7 298 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 RNFT2Q96EX2 444 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 BORCS8Q96FH0 119 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 HRASLS5Q96KN8 279 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 BOLA1Q9Y3E2 137 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 AMMECR1Q9Y4X0 333 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-203ENST00000409225 TMEM14AQ9Y6G1 99 aa13.04□□□□□ -0.32
CHMP3-203ENST00000409225 SORL1Q92673 2214 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 A0A087X0M5 115 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 TRBV2A0A0J9YWF9 115 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 A0A1B0GX30 115 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 CCRL2O00421 344 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 E2F6O75461 281 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 IGHV3-7P01780 117 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 HMGN1P05114 100 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 HCKP08631 526 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 ATP6V1B2P21281 511 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 PRDX6P30041 224 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 GPR12P47775 334 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 POU3F4P49335 361 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 INSL3P51460 131 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 FHL3Q13643 280 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 ZNF146Q15072 292 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 C16orf89Q6UX73 402 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 Q6ZSR3 168 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 OR11H1Q8NG94 326 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms