RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 LOC105371242A0A075B767 164 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 YPEL1O60688 119 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 OR5G3P0C626 314 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 ZNF823P16415 610 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 ZNF92Q03936 586 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 TLE1Q04724 770 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 FMODQ06828 376 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 TCEAL5Q5H9L2 206 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 C9orf50Q5SZB4 431 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 RIPPLY2Q5TAB7 128 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 TCEAL8Q8IYN2 117 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 TECTBQ96PL2 329 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 CIB3Q96Q77 187 aaPredicted RBP11.15□□□□□ -0.62
HERC3-203ENST00000407637 YPEL2Q96QA6 119 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 PECRQ9BY49 303 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 PBOV1Q9GZY1 135 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 RBKSQ9H477 322 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 C11orf1Q9H5F2 150 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 PLA2G3Q9NZ20 509 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 PRSS50Q9UI38 385 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 NXT1Q9UKK6 140 aaKnown RBP11.15□□□□□ -0.62
HERC3-203ENST00000407637 MCTS1Q9ULC4 181 aaKnown RBP11.15□□□□□ -0.62
HERC3-203ENST00000407637 SPACA6W5XKT8 324 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 UNC80Q8N2C7 3258 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 LILRA1O75019 489 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 TMEM225BP0DP42 221 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 CDKN1AP38936 164 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 ATP6V1FQ16864 119 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 TMEM241Q24JQ0 296 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 MEX3BQ6ZN04 569 aaKnown RBP11.14□□□□□ -0.63
HERC3-203ENST00000407637 Q6ZWC4 215 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 NUP54Q7Z3B4 507 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 TMEM252Q8N6L7 170 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 OR51E1Q8TCB6 317 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 OR2A5Q96R48 311 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 RASL10BQ96S79 203 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 LYRM4Q9HD34 91 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 ZNF319Q9P2F9 582 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 NAT8Q9UHE5 227 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 MAP1LC3B2A6NCE7 125 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 LRRC3CA6NJW4 275 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 CYBAP13498 195 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 MRPS34P82930 218 aaKnown RBP11.14□□□□□ -0.63
HERC3-203ENST00000407637 TCTN1Q2MV58 587 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 BSXQ3C1V8 233 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 SVIPQ8NHG7 77 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 TM4SF19Q96DZ7 209 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 MAP1LC3BQ9GZQ8 125 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 MBNL1Q9NR56 388 aaKnown RBP11.14□□□□□ -0.63
HERC3-203ENST00000407637 TMEM106BQ9NUM4 274 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 WNT6Q9Y6F9 365 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 COL4A6Q14031 1691 aa11.14□□□□□ -0.63
HERC3-203ENST00000407637 IGLON5A6NGN9 336 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 ZNF728P0DKX0 622 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 CT45A8P0DMV1 189 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 CT45A9P0DMV2 189 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 ZNF10P21506 573 aaPredicted RBP11.13□□□□□ -0.63
HERC3-203ENST00000407637 GCH1P30793 250 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 MESP2Q0VG99 397 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 CT45A2Q5DJT8 189 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 AGBL4Q5VU57 503 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 GRINAQ7Z429 371 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 ODF3L1Q8IXM7 274 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 AGBL5Q8NDL9 886 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 OR11L1Q8NGX0 322 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 VN1R17PQ8TDU5 208 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 MSI2Q96DH6 328 aaKnown RBP11.13□□□□□ -0.63
HERC3-203ENST00000407637 PLEKHF2Q9H8W4 249 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 INSL6Q9Y581 213 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 DOCK11Q5JSL3 2073 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 ARHGAP21Q5T5U3 1957 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 A0A1W2PN81 502 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 NKX2-6A6NCS4 301 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 M0QZ24 198 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 PHF1O43189 567 aaPredicted RBP11.13□□□□□ -0.63
HERC3-203ENST00000407637 WISP1O95388 367 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 CHRNA7P36544 502 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 RANP62826 216 aaKnown RBP11.13□□□□□ -0.63
HERC3-203ENST00000407637 ZNF154Q13106 437 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 TMEM52BQ4KMG9 183 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 PSRC1Q6PGN9 363 aaPredicted RBP11.13□□□□□ -0.63
HERC3-203ENST00000407637 FAM180AQ6UWF9 173 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 H1FOOQ8IZA3 346 aaPredicted RBP11.13□□□□□ -0.63
HERC3-203ENST00000407637 LRTM2Q8N967 370 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 OR2T10Q8NGZ9 312 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 MRGPRDQ8TDS7 321 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 CAPNS2Q96L46 248 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 LYRM2Q9NU23 88 aaPredicted RBP11.13□□□□□ -0.63
HERC3-203ENST00000407637 HEBP2Q9Y5Z4 205 aa11.13□□□□□ -0.63
HERC3-203ENST00000407637 TRAV1-1A0A0B4J248 108 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 C17orf51A8MQB3 221 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 MSTNO14793 375 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 GALR2O43603 387 aaPredicted RBP11.12□□□□□ -0.63
HERC3-203ENST00000407637 NXPH3O95157 252 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 HLA-HP01893 362 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 RPL23P62829 140 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms