RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 GNG10P50151 68 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 RAB31Q13636 194 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 AKR1C8PQ5T2L2 129 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 GPR157Q5UAW9 335 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 H2BFWTQ7Z2G1 175 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 ITLN1Q8WWA0 313 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 ZNF436Q9C0F3 470 aaPredicted RBP7.87□□□□□ -1.15
LIG4-202ENST00000405925 SLC25A31Q9H0C2 315 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 TAS2R3Q9NYW6 316 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 PCDH15Q96QU1 1955 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 IGHV3OR15-7A0A075B7D8 119 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 SSX4O60224 188 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 FBXO24O75426 580 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 OR4A8P0C604 315 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 CHRNB4P30926 498 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 MPV17LQ2QL34 196 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 ELP2Q6IA86 826 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 OR5AP2Q8NGF4 316 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 MBD2Q9UBB5 411 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 SYNGR1O43759 233 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 CEACAM6P40199 344 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 NKX2-1P43699 371 aaPredicted RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 NAAAQ02083 359 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 UBE2V2Q15819 145 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 GABRA6Q16445 453 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 RNFT1Q5M7Z0 435 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 H3F3CQ6NXT2 135 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 Q6ZS92 163 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 TMEM217Q8N7C4 229 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 STOML3Q8TAV4 291 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 TMEM171Q8WVE6 324 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 BCL2L2Q92843 193 aaPredicted RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 AK3Q9UIJ7 227 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 PSG11Q9UQ72 335 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 TLN1Q9Y490 2541 aaKnown RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 hADV38S2A0JD32 116 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 TMEM210A6NLX4 147 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 M0R1X1 148 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 NDUFB6O95139 128 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 ADRA2AP08913 450 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 RPP30P78346 268 aaKnown RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 NKX6-1P78426 367 aaPredicted RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 DEFA5Q01523 94 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 FOXF2Q12947 444 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 CLINT1Q14677 625 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 ZNF79Q15937 498 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 FAM76BQ5HYJ3 339 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 C1orf174Q8IYL3 243 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 LYG1Q8N1E2 194 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 RGP1Q92546 391 aaPredicted RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 UPRTQ96BW1 309 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 HDHD3Q9BSH5 251 aaPredicted RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 LIN7CQ9NUP9 197 aaKnown RBP7.86□□□□□ -1.15
LIG4-202ENST00000405925 ONECUT1Q9UBC0 465 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 ANXA10Q9UJ72 324 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 RNF115Q9Y4L5 304 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 SPTBN4Q9H254 2564 aa7.86□□□□□ -1.15
LIG4-202ENST00000405925 A0A0B4J2A0 478 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 SHISA3A0PJX4 238 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 TRIM64BA6NI03 449 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 GPR31O00270 319 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 ST8SIA3O43173 380 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 SYNGR3O43761 229 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 TMEM128Q5BJH2 165 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 UNQ9370/PRO34162Q6UXP9 181 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 NHLRC1Q6VVB1 395 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 SHPKQ9UHJ6 478 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 ATPIF1Q9UII2 106 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 GTF3C1Q12789 2109 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 PRR32B1ATL7 298 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 SCGB2A1O75556 95 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 ADRB1P08588 477 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 TPT1P13693 172 aaKnown RBP7.85□□□□□ -1.15
LIG4-202ENST00000405925 COX7A1P24310 79 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 MDH2P40926 338 aaKnown RBP7.85□□□□□ -1.15
LIG4-202ENST00000405925 ERVS71-1P61550 626 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 KCNMB1Q16558 191 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 TPRX1Q8N7U7 411 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 OR8G5Q8NG78 346 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 OR5D13Q8NGL4 314 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 SDSLQ96GA7 329 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 OR6C3Q9NZP0 311 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 ANKRD20A5PA0PJZ0 165 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 CNIH1O95406 144 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 CELA3BP08861 270 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 PRF1P14222 555 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 CD80P33681 288 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 RBM11P57052 281 aaKnown RBP7.85□□□□□ -1.15
LIG4-202ENST00000405925 LYG2Q86SG7 212 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 PDZD9Q8IXQ8 264 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 RNF122Q9H9V4 155 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 TAF9BQ9HBM6 251 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 ZNF355PQ9NSJ1 428 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 NPAP1Q9NZP6 1156 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 TMA7Q9Y2S6 64 aaKnown RBP7.85□□□□□ -1.15
LIG4-202ENST00000405925 ADAMTS9Q9P2N4 1935 aa7.85□□□□□ -1.15
LIG4-202ENST00000405925 SS18L1O75177 396 aaPredicted RBP7.84□□□□□ -1.15
LIG4-202ENST00000405925 HTR2BP41595 481 aa7.84□□□□□ -1.15
LIG4-202ENST00000405925 H3F3AP84243 136 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms