RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 APOL4Q9BPW4 351 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SEBOXQ9HB31 216 aaPredicted RBP9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 PALMDQ9NP74 551 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 LAMP5Q9UJQ1 280 aa9.28□□□□□ -0.92
SPTLC1P3-201ENST00000403408 A0A087X0M5 115 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 A0A1B0GX30 115 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TCRBV5S2A0A599 114 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PRR23D1E9PI22 279 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 MGST3O14880 152 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IGHV3-7P01780 117 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PRR23D2P0DMB1 279 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CGB3P0DN86 165 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CGB7P0DN87 165 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 H2AFXP16104 143 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 BCL3P20749 454 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CDX1P47902 265 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GP2P55259 537 aaKnown RBP9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SNU13P55769 128 aaKnown RBP9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ESRRGP62508 458 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CFHR3Q02985 330 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 AESQ08117 197 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 KIAA0141Q14154 515 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ZNF146Q15072 292 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CYP2R1Q6VVX0 501 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SLC35E3Q7Z769 313 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TRAPPC6BQ86SZ2 158 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ZNF679Q8IYX0 411 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ELMOD2Q8IZ81 293 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 EMG1Q92979 244 aaKnown RBP9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ITFG2Q969R8 447 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 FEVQ99581 238 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 YIPF3Q9GZM5 350 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SLC7A11Q9UPY5 501 aa9.27□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TRIM64CA6NLI5 447 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SIRPB1O00241 398 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PRODHO43272 600 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GMNNO75496 209 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 LY86O95711 162 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 FAM106CPP0CH98 169 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CCL1P22362 96 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 APOFQ13790 326 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 RBM39Q14498 530 aaKnown RBP9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 MEPCEQ7L2J0 689 aaKnown RBP9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 COMMD1Q8N668 190 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR10G2Q8NGC3 310 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR8U1Q8NH10 309 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TEX47Q8TBZ9 253 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TM2D3Q9BRN9 247 aa9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 NKX1-2Q9UD57 310 aaPredicted RBP9.26□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IGKV1-12A0A0C4DH73 117 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OOSP1A8MZH6 123 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 H3BN98 237 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 LCE2BO14633 110 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 FGF16O43320 207 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IGKV1D-12P01611 117 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SPNP16150 400 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TMEM11P17152 192 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GPR12P47775 334 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CDK5Q00535 292 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PNLIPRP3Q17RR3 467 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SLC35D3Q5M8T2 416 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TMEM236Q5W0B7 351 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR52W1Q6IF63 320 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TEX38Q6PEX7 206 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 Q8N6K4 173 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 KIRREL1Q96J84 757 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 MROQ9BYG7 248 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PPIL3Q9H2H8 161 aaKnown RBP9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PLSCR3Q9NRY6 295 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TAS2R3Q9NYW6 316 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 MRM2Q9UI43 246 aaKnown RBP9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR52A1Q9UKL2 312 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GTF2A1LQ9UNN4 478 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SAMHD1Q9Y3Z3 626 aaKnown RBP9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 R4GMQ9 66 aa9.25□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TRGV10A0A0A0MS01 117 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IGKV1-9A0A0C4DH69 117 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TRBV2A0A0J9YWF9 115 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ODAMA1E959 279 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 LOC110117498-PIK3R3F6TDL0 507 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CCRL2O00421 344 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TOR1AO14656 332 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CCDC22O60826 627 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ZNF254O75437 659 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR2H2O95918 312 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IGKV1D-33P01593 117 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IGKV1-33P01594 117 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CEACAM3P40198 252 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 MNDAP41218 407 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 RIDAP52758 137 aaKnown RBP9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 RPS7P62081 194 aaKnown RBP9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SLC35B1P78383 322 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 FOXE3Q13461 319 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GPR50Q13585 617 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 EBI3Q14213 229 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ODF4Q2M2E3 257 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ZNF829Q3KNS6 432 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SLX4IPQ5VYV7 408 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR2T5Q6IEZ7 315 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms