RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 OR1P1Q8NH06 330 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 CITED1Q99966 193 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 WNT5BQ9H1J7 359 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 OCIAD1Q9NX40 245 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 HIST1H1BP16401 226 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 HLA-GP17693 338 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 FCRL6Q6DN72 434 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 FAM53AQ6NSI3 398 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 OR5M9Q8NGP3 310 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 RAB40CQ96S21 281 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 TMEM167BQ9NRX6 74 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 FBXL17Q9UF56 701 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 MYH7BA7E2Y1 1941 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 C3orf85A0A1B0GTC6 90 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 FBXL14Q8N1E6 418 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 LRRC3BQ96PB8 259 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 TCHHQ07283 1943 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 MICBQ29980 383 aa11.15□□□□□ -0.63
CACNA1C-209ENST00000399603 GSG1Q2KHT4 349 aa11.15□□□□□ -0.63
CACNA1C-209ENST00000399603 RSPO2Q6UXX9 243 aaPredicted RBP11.15□□□□□ -0.63
CACNA1C-209ENST00000399603 TMEM229BQ8NBD8 167 aa11.15□□□□□ -0.63
CACNA1C-209ENST00000399603 C8orf44Q96CB5 159 aa11.15□□□□□ -0.63
CACNA1C-209ENST00000399603 PRR13Q9NZ81 148 aa11.15□□□□□ -0.63
CACNA1C-209ENST00000399603 SPINK2P20155 84 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 MAS1LP35410 378 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 CLDN15P56746 228 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 B4GALNT1Q00973 533 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 RPL18Q07020 188 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 LIAT1Q6ZQX7 453 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 SLC36A1Q7Z2H8 476 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 ATOH7Q8N100 152 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 OR10AG1Q8NH19 301 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 GUCD1Q96NT3 240 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 TMEM215Q68D42 235 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 GBGT1Q8N5D6 347 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 ATOH8Q96SQ7 321 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 MANBALQ9NQG1 85 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 FAM206AQ9NX38 181 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 MYH3P11055 1940 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 SLCO2B1O94956 709 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 PNLIPRP2P54317 469 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 NHLRC1Q6VVB1 395 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 C12orf54Q6X4T0 127 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 KCNE4Q8WWG9 221 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 TREM2Q9NZC2 230 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 SMAGPQ0VAQ4 97 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 C20orf27Q9GZN8 174 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 KBTBD11O94819 623 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 TYMSP04818 313 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 PGFP49763 221 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 PAFAH1B2P68402 229 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 CTU2Q2VPK5 515 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 GLDNQ6ZMI3 551 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 SLC25A43Q8WUT9 341 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 LANCL1O43813 399 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 PAGE4O60829 102 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 OR5AC1P0C628 307 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 TMEM249Q2WGJ8 235 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 OR2C3Q8N628 320 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 SOSTQ9BQB4 213 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 ASCL3Q9NQ33 180 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 OR2W1Q9Y3N9 320 aa11.14□□□□□ -0.63
CACNA1C-209ENST00000399603 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 A0A0B4J293 547 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 A0A1B0GWB2 263 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 TMEM262E9PQX1 116 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 FCMRO60667 390 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 ERGP11308 486 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 KISS1RQ969F8 398 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 RAB33BQ9H082 229 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 LINC01553A4QN01 128 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 PGA3P0DJD8 388 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 EPHA8P29322 1005 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 FUT6P51993 359 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 EGR3Q06889 387 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 PPP1R1AQ13522 171 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 TMEM174Q8WUU8 243 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 SMIM19Q96E16 107 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 PERPQ96FX8 193 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 TAAR3PQ9P1P4 343 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 ARFGEF2Q9Y6D5 1785 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 POLR2GP62487 172 aaKnown RBP eCLIP11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 C2orf83Q53S99 150 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 TMEM255AQ5JRV8 349 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 ASCL4Q6XD76 172 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 OR8G5Q8NG78 346 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 TMUB1Q9BVT8 246 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 ANGPTL4Q9BY76 406 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 MRPL16Q9NX20 251 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 PPIL1Q9Y3C6 166 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 COX11Q9Y6N1 276 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 EPXP11678 715 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 DEFB109BQ30KR1 87 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 ERASQ7Z444 233 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 ARIH2OSQ8N7S6 290 aa11.13□□□□□ -0.63
CACNA1C-209ENST00000399603 DNAJB12Q9NXW2 375 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms