RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 BHLHE40O14503 412 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 WNT1P04628 370 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 GTF2F2P13984 249 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 HOXB4P17483 251 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 PDLIM4P50479 330 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF85Q03923 595 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 QPRTQ15274 297 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 CDSNQ15517 529 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 OOSP2Q86WS3 158 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR6V1Q8N148 313 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 YIPF7Q8N8F6 280 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 SFXN5Q8TD22 340 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 TXNDC15Q96J42 360 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 S1PR3Q99500 378 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 GABRG3Q99928 467 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 NT5DC2Q9H857 520 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 TMEM27Q9HBJ8 222 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 TECRQ9NZ01 308 aaKnown RBP5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 RPS6KB2Q9UBS0 482 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF391Q9UJN7 358 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 SIGLEC7Q9Y286 467 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 TP53TG5Q9Y2B4 290 aa5.35□□□□□ -1.55
TRAPPC13-202ENST00000399438 FREM3P0C091 2139 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 A1L4Q6 167 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 ARRDC5A6NEK1 342 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 TNFP01375 233 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 SCGB1A1P11684 91 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 FUT3P21217 361 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 HTR1FP30939 366 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 GNRHRP30968 328 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 MAP2K3P46734 347 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 GLIPR1P48060 266 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 EFNA3P52797 238 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 ARHGAP11BQ3KRB8 267 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 PDZD11Q5EBL8 140 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 FHL5Q5TD97 284 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 LGI3Q8N145 548 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR10K1Q8NGX5 313 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 POP5Q969H6 163 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 MARVELD3Q96A59 401 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 CHIAQ9BZP6 476 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF223Q9UK11 482 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 TCF19Q9Y242 345 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 GOLT1BQ9Y3E0 138 aa5.34□□□□□ -1.55
TRAPPC13-202ENST00000399438 NSG1A0A0A6YYJ2 146 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 A0A0J9YY10 115 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 TMEM72A0PK05 275 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 PQLC2LA1A4F0 135 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 PROB1E7EW31 1015 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 SIRPB1O00241 398 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 LYRM1O43325 122 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 FOXS1O43638 330 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 WDPCPO95876 746 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 WNT2P09544 360 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 ATF1P18846 271 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 PGCP20142 388 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 EDNRAP25101 427 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR1D5P58170 312 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 KIR2DS3Q14952 304 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 MOB3BQ86TA1 216 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 CMTM4Q8IZR5 234 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 ARIH2OSQ8N7S6 290 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZNF485Q8NCK3 441 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR51A4Q8NGJ6 313 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 CNN2Q99439 309 aaKnown RBP5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 ABHD14AQ9BUJ0 271 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR11A1Q9GZK7 315 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 NXF5Q9H1B4 397 aaKnown RBP5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 ABCG5Q9H222 651 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 PATZ1Q9HBE1 687 aaKnown RBP5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 ADGRL4Q9HBW9 690 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 PRTFDC1Q9NRG1 225 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZNF222Q9UK12 451 aa5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 EXOSC1Q9Y3B2 195 aaKnown RBP5.34□□□□□ -1.56
TRAPPC13-202ENST00000399438 KIF26BQ2KJY2 2108 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 RIF1Q5UIP0 2472 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 ISPDA4D126 451 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 MRPS14O60783 128 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 LYPD3O95274 346 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 HLA-DPB1P04440 258 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 DBIP07108 87 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 APOBEC1P41238 236 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 DNASE1L1P49184 302 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 CX3CR1P49238 355 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 AP2S1P53680 142 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 RPL32P62910 135 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 RSPO4Q2I0M5 234 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 LEG1Q6P5S2 330 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 LANCL3Q6ZV70 420 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC29A4Q7RTT9 530 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 IL17DQ8TAD2 202 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 RNF121Q9H920 327 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 GSKIPQ9P0R6 139 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 PLA2G2DQ9UNK4 145 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 HSPB11Q9Y547 144 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 HEBP2Q9Y5Z4 205 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 BDP1A6H8Y1 2624 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 PI4KAP42356 2102 aa5.33□□□□□ -1.56
TRAPPC13-202ENST00000399438 DOCK7Q96N67 2140 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms