RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, human

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-208	ENST00000399349	CDIPT	O14735	213 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	SOX8	P57073	446 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	HIST1H3A	P68431	136 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	CLEC18B	Q6UXF7	455 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	NUBPL	Q8TB37	319 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	BCL2L2	Q92843	193 aa	Predicted RBP	11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	ISOC2	Q96AB3	205 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	LRRC3B	Q96PB8	259 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	RAB40C	Q96S21	281 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	NTM	Q9P121	344 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	SPTBN1	Q01082	2364 aa	Known RBP	11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	TRAV34	A0A0B4J273	112 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	ARG1	P05089	322 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	FBP1	P09467	338 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	HES3	Q5TGS1	186 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	ASB10	Q8WXI3	467 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	TMEM56	Q96MV1	263 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	PCED1A	Q9H1Q7	454 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	LOC105371267	A0A1B0GV96	52 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	RAC3	P60763	192 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	TNFAIP6	P98066	277 aa	Predicted RBP	11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	JMJD6	Q6NYC1	403 aa	Predicted RBP	11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	TMEM65	Q6PI78	240 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	OR6X1	Q8NH79	312 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	ABHD3	Q8WU67	409 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	PIK3IP1	Q96FE7	263 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	ANXA10	Q9UJ72	324 aa		11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	ELF5	Q9UKW6	265 aa	Predicted RBP	11.63	□□□□□ -0.55
ITSN1-208	ENST00000399349	PATE3	B3GLJ2	98 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	CLDN34	H7C241	214 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	CYR61	O00622	381 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	SLC35B3	Q9H1N7	401 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	TINAG	Q9UJW2	476 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	TGOLN2	O43493	480 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	SLC25A5	P05141	298 aa	Known RBP	11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	CYC1	P08574	325 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	GAB4	Q2WGN9	574 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	OR11H7	Q8NGC8	314 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	RSRP1	Q9BUV0	290 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	LIPT2	A6NK58	231 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	LANCL1	O43813	399 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	ZNF737	O75373	536 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	CCL3	P10147	92 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	CD200	P41217	278 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	MAGEA5	P43359	124 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	CAMP	P49913	170 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	FNDC7	Q5VTL7	733 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	C1orf210	Q8IVY1	113 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	DYRK2	Q92630	601 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	TM4SF19	Q96DZ7	209 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	OR4C45	A6NMZ5	311 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	ZNHIT1	O43257	154 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	ORM2	P19652	201 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	HNRNPA3	P51991	378 aa	Known RBP	11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	TMEM241	Q24JQ0	296 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	PRO1933	Q9H354	126 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	AMDHD2	Q9Y303	409 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	KIAA1551	Q9HCM1	1747 aa		11.62	□□□□□ -0.55
ITSN1-208	ENST00000399349	OR5H1	A6NKK0	313 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	OGG1	O15527	345 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	RNASEK	Q6P5S7	137 aa	Known RBP	11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	UQCC3	Q6UW78	93 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	LIAT1	Q6ZQX7	453 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	MOB1B	Q7L9L4	216 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	OR10G4	Q8NGN3	311 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	OR10G9	Q8NGN4	311 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	OR10G7	Q8NGN6	311 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	M1AP	Q8TC57	530 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	ZPLD1	Q8TCW7	415 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	CT55	Q8WUE5	264 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	NTNG2	Q96CW9	530 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	CACNA1D	Q01668	2161 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	TOX3	O15405	576 aa	Predicted RBP	11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	G0S2	P27469	103 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	GALR1	P47211	349 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	KLF3	P57682	345 aa	Predicted RBP	11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	TBC1D26	Q86UD7	250 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	OR2Y1	Q8NGV0	311 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	NOL4L	Q96MY1	436 aa	Predicted RBP	11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	LIPG	Q9Y5X9	500 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	CDC34	P49427	236 aa	Predicted RBP	11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	C21orf58	P58505	322 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	EIF3I	Q13347	325 aa	Known RBP	11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	HFE	Q30201	348 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	SLC52A3	Q9NQ40	469 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	TCFL5	Q9UL49	500 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	IGF2	P01344	180 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	EFNB2	P52799	333 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	SKP2	Q13309	424 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	ZNF273	Q14593	569 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	FA2H	Q7L5A8	372 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	MYPOP	Q86VE0	399 aa	Predicted RBP	11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	SCMH1	Q96GD3	660 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	CHRDL1	Q9BU40	450 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	AAMDC	Q9H7C9	122 aa		11.61	□□□□□ -0.55
ITSN1-208	ENST00000399349	TMPRSS2	O15393	492 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms