RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 GRINAQ7Z429 371 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 OR5C1Q8NGR4 320 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 ZNF728P0DKX0 622 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 KLF3P57682 345 aaPredicted RBP13.14□□□□□ -0.31
CYLD-202ENST00000398568 ZNF92Q03936 586 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 TMEM187Q14656 261 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 TMEM52BQ4KMG9 183 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 C2orf27AQ580R0 203 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 DPPA3Q6W0C5 159 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 ZCCHC14Q8WYQ9 949 aaKnown RBP13.14□□□□□ -0.31
CYLD-202ENST00000398568 FAM122AQ96E09 287 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 TECTBQ96PL2 329 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 PYGO2Q9BRQ0 406 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 PAM16Q9Y3D7 125 aa13.14□□□□□ -0.31
CYLD-202ENST00000398568 MAP1LC3B2A6NCE7 125 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 CEBPZOSA8MTT3 80 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 SMIM10L1P0DMW3 83 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 RUNX1Q01196 453 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 RUNX3Q13761 415 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 ZNF787Q6DD87 383 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 DGAT2L6Q6ZPD8 337 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 SMIM10Q96HG1 83 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 VAMP8Q9BV40 100 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 MAP1LC3BQ9GZQ8 125 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 NAT8Q9UHE5 227 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 PRSS50Q9UI38 385 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 SNRNP200O75643 2136 aaKnown RBP13.13□□□□□ -0.31
CYLD-202ENST00000398568 ZNF732B4DXR9 585 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 AQP7O14520 342 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 SLC35E2P0CK97 266 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 SELENOTP62341 195 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 LIAT1Q6ZQX7 453 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 TMEM217Q8N7C4 229 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 RERGQ96A58 199 aaPredicted RBP13.13□□□□□ -0.31
CYLD-202ENST00000398568 SLC35E1Q96K37 410 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 SMIM7Q9BQ49 75 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 CBY3A6NI87 242 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 ETV2O00321 342 aaPredicted RBP13.13□□□□□ -0.31
CYLD-202ENST00000398568 ADH5P11766 374 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 GNB2P62879 340 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 GABREP78334 506 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 IL24Q13007 206 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 TMEM241Q24JQ0 296 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 FAM180AQ6UWF9 173 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
CYLD-202ENST00000398568 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
CYLD-202ENST00000398568 CHD3Q12873 2000 aaKnown RBP13.12□□□□□ -0.31
CYLD-202ENST00000398568 LAMA1P25391 3075 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 IGSF23A1L1A6 192 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 A8MXE2 369 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 IFNA1P01562 189 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 FXYD4P59646 89 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 PHLDA2Q53GA4 152 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 PRSS41Q7RTY9 318 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 BCORP1Q8N888 145 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 PBOV1Q9GZY1 135 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 NKX6-3A6NJ46 265 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 PDGFBP01127 241 aaPredicted RBP13.12□□□□□ -0.31
CYLD-202ENST00000398568 TTRP02766 147 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 NKX2-1P43699 371 aaPredicted RBP13.12□□□□□ -0.31
CYLD-202ENST00000398568 ZFP36L1Q07352 338 aaKnown RBP13.12□□□□□ -0.31
CYLD-202ENST00000398568 BSXQ3C1V8 233 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 LCN15Q6UWW0 184 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 H1FOOQ8IZA3 346 aaPredicted RBP13.12□□□□□ -0.31
CYLD-202ENST00000398568 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 OR5L1Q8NGL2 311 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 ELSPBP1Q96BH3 223 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 CYYR1Q96J86 154 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 OR51I2Q9H344 312 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 ELL3Q9HB65 397 aaPredicted RBP13.12□□□□□ -0.31
CYLD-202ENST00000398568 B3GAT1Q9P2W7 334 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 ZNF850A8MQ14 1090 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 SERPINE3A8MV23 424 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 CST7O76096 145 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 ONECUT2O95948 504 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 TSPO2Q5TGU0 170 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 RNF144BQ7Z419 303 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 SHISA5Q8N114 240 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 OR51G1Q8NGK1 321 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 ADOQ96SZ5 270 aa13.12□□□□□ -0.31
CYLD-202ENST00000398568 CYR61O00622 381 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 NXPH2O95156 264 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 GZMHP20718 246 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 DYNLT3P51808 116 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 MRPS34P82930 218 aaKnown RBP13.11□□□□□ -0.31
CYLD-202ENST00000398568 ATP6V1FQ16864 119 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 ACTL10Q5JWF8 245 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 MEX3BQ6ZN04 569 aaKnown RBP13.11□□□□□ -0.31
CYLD-202ENST00000398568 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 CIB3Q96Q77 187 aaPredicted RBP13.11□□□□□ -0.31
CYLD-202ENST00000398568 PECRQ9BY49 303 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 ZNF665Q9H7R5 613 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 GPR35Q9HC97 309 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 MRPS2Q9Y399 296 aaKnown RBP13.11□□□□□ -0.31
CYLD-202ENST00000398568 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms