RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 P2RY4P51582 365 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 IL24Q13007 206 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 PDZK1IP1Q13113 114 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 LGI3Q8N145 548 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 DUSP23Q9BVJ7 150 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 TIMM10BQ9Y5J6 103 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 EIF1BO60739 113 aaKnown RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 CNR1P21554 472 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 EIF1P41567 113 aaKnown RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 NAAAQ02083 359 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 GNMTQ14749 295 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 PEA15Q15121 130 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 PNLIPRP3Q17RR3 467 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 AVPI1Q5T686 147 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 SECTM1Q8WVN6 248 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 TRAV39A0A0B4J263 110 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 SHISA7A6NL88 538 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 H0YIZ8 118 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 SRSF10O75494 262 aaKnown RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 GP1BAP07359 652 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 PTGER4P35408 488 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 PTGDSP41222 190 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 TLE4Q04727 773 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 OR2A2Q6IF42 318 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 EIF5AL1Q6IS14 154 aaKnown RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 VASH2Q86V25 355 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 RTN4IP1Q8WWV3 396 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 ALKBH3Q96Q83 286 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 DEFB127Q9H1M4 99 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 PIGMQ9H3S5 423 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 GNB4Q9HAV0 340 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 RLFQ13129 1914 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 AQP7P3A6NL99 342 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 RNASEK-C17orf49H0YIS7 233 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 C5orf24Q7Z6I8 188 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 IL22RA1Q8N6P7 574 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 ZSCAN4Q8NAM6 433 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 OR6X1Q8NH79 312 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 OR2V1Q8NHB1 315 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 EMG1Q92979 244 aaKnown RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 THOC3Q96J01 351 aaKnown RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 VAMP8Q9BV40 100 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 HINT2Q9BX68 163 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 RAB18Q9NP72 206 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 ABCD4O14678 606 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 YIF1AO95070 293 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 HKR1P10072 659 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 TSPO2Q5TGU0 170 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 FAM166AQ6J272 317 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 ZFP62Q8NB50 900 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 NANPQ8TBE9 248 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 SGK3Q96BR1 496 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 SRXN1Q9BYN0 137 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 NPIPB7O75200 414 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 NFYBP25208 207 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 KCNJ3P48549 501 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 DSCR4P56555 118 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 PLAC9Q5JTB6 97 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 NUBPLQ8TB37 319 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 FAM213BQ8TBF2 198 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF837Q96EG3 531 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-202ENST00000398417 TECTBQ96PL2 329 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 RAB1BQ9H0U4 201 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 C12orf49Q9H741 205 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 FBXL17Q9UF56 701 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 OR6C65A6NJZ3 312 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SCAF4O95104 1147 aaKnown RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 IGLV3-19P01714 112 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 CTSDP07339 412 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SFTA3P0C7M3 94 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 OR10J1P30954 320 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 MAGEA5P43359 124 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF488Q96MN9 340 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SLC26A1Q9H2B4 701 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SPACA1Q9HBV2 294 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 IFNA5P01569 189 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SCGB1A1P11684 91 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 TCN2P20062 427 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 CHATP28329 748 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 TWIST1Q15672 202 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 MAJINQ3KP22 176 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SVBPQ8N300 66 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ARRDC1Q8N5I2 433 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 CLRN3Q8NCR9 226 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 OR11L1Q8NGX0 322 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SCGB1C1Q8TD33 95 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PCED1AQ9H1Q7 454 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 VCX2Q9H322 139 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF581Q9P0T4 197 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PUS1Q9Y606 427 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ACACAQ13085 2346 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 IGKV1D-8A0A087WSZ0 117 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 A0A1B0GTQ1 180 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 A0A1W2PR80 420 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 STAG3L2P0CL84 134 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PCOLCEQ15113 449 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 DPPA2Q7Z7J5 298 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 OSR2Q8N2R0 312 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 OR9K2Q8NGE7 335 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 IL1F10Q8WWZ1 152 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms