RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ADGRG7Q96K78 797 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 TMEM208Q9BTX3 173 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 TUBD1Q9UJT1 453 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 ZNF705GA8MUZ8 300 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 PIAS2O75928 621 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 EDN3P14138 238 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 PLPPR5Q32ZL2 321 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 LCN10Q6JVE6 187 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 SLC25A47Q6Q0C1 308 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 PLXDC1Q8IUK5 500 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 HDHD3Q9BSH5 251 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 C1orf123Q9NWV4 160 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 CDRT15L2A8MXV6 281 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 AMBPP02760 352 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 FAM69BQ5VUD6 431 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 CRIP3Q6Q6R5 217 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 C6orf201Q7Z4U5 140 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 ANKRD37Q7Z713 158 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 DTX1Q86Y01 620 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 FAM89BQ8N5H3 189 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 FAM213BQ8TBF2 198 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 DTD1Q8TEA8 209 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 SSC4DQ8WTU2 575 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 LYZL4Q96KX0 146 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 SNX22Q96L94 193 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 ZNF2Q9BSG1 426 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 CFAP54Q96N23 3096 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 A0A1B0GV50 99 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 F5H5K5 113 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 H0YL77 283 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 DUX1O43812 170 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 SOX15O60248 233 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 OR5AC1P0C628 307 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 PGA5P0DJD9 388 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 FAHP16930 419 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 CCL1P22362 96 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 FAM189A2Q15884 450 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 C4orf17Q53FE4 359 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 ALKBH2Q6NS38 261 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 TMEM156Q8N614 296 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 OR10G3Q8NGC4 313 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 FNDC9Q8TBE3 224 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 RHBDD1Q8TEB9 315 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 PIGTQ969N2 578 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 ZNF501Q96CX3 271 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 WNT5BQ9H1J7 359 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 METTL7AQ9H8H3 244 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 FOXD3Q9UJU5 478 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 CABIN1Q9Y6J0 2220 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 EXPH5Q8NEV8 1989 aa13.92□□□□□ -0.18
CHMP1A-201ENST00000397901 TMEM265A0A087WTH1 108 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 DHRS7CA6NNS2 312 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 SRP19P09132 144 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 FCGR2AP12318 317 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 RGS19P49795 217 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 H3F3AP84243 136 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 SLC35E3Q7Z769 313 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 NFAM1Q8NET5 270 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 MRPL24Q96A35 216 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 MRGPRX4Q96LA9 322 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 NIPSNAP3BQ9BS92 247 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 WFDC1Q9HC57 220 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 MCTS1Q9ULC4 181 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 FOXI3A8MTJ6 420 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 B4DEV8 164 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 K7N7A8 449 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 ZNF205O95201 554 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 ZNF43P17038 809 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 SULF2Q8IWU5 870 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 DKKL1Q9UK85 242 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 NCOA6Q14686 2063 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-201ENST00000397901 E5RGE8 158 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 RAB35Q15286 201 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 HAGHQ16775 308 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 SLC38A9Q8NBW4 561 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 SH3BGRL3Q9H299 93 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 NSG2Q9Y328 171 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 M0QZK8 103 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 GGCTO75223 188 aaKnown RBP13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 CEBPGP53567 150 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 TMEM176BQ3YBM2 270 aaPredicted RBP13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 SGPP2Q8IWX5 399 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 SPEM1Q8N4L4 309 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 OR8G5Q8NG78 346 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 ZNF160Q9HCG1 818 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 WNT16Q9UBV4 365 aa13.9□□□□□ -0.18
CHMP1A-201ENST00000397901 GPR137BO60478 399 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 IFNA21P01568 189 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 NPSP0C0P6 89 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 PNLIPP16233 465 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 MSX1P28360 303 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 CLDN17P56750 224 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 ERVFC1-1P60608 527 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 RND3P61587 244 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 GRB2P62993 217 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 COTL1Q14019 142 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 TMEM182Q6ZP80 229 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 THNSL2Q86YJ6 484 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms