RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 DUX4L4P0CJ87 422 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DUX4L5P0CJ88 424 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DUX4L6P0CJ89 424 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DUX4L7P0CJ90 424 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 CPT2P23786 658 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DYNC1I2Q13409 638 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 MPV17LQ2QL34 196 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DUX4L9Q6RFH8 374 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM216BQ8N7L0 139 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 MED30Q96HR3 178 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 PATZ1Q9HBE1 687 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DUX4Q9UBX2 424 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 SIGLEC5O15389 551 aa19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 USF1P22415 310 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 IL13RA1P78552 427 aa19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 NEIL1Q96FI4 390 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 SLIRPQ9GZT3 109 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 ATG5Q9H1Y0 275 aa19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 RHBDL2Q9NX52 303 aa19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 ZNF581Q9P0T4 197 aa19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 KAAG1Q9UBP8 84 aa19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 CTSZQ9UBR2 303 aa19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 MAB21L2Q9Y586 359 aa19.67■□□□□ 0.74
TSPAN4-203ENST00000397397 A0A0A6YYD4 124 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A10PA6NDY2 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A18PA6NE21 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A16PA6NEW6 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A20PA6NIJ5 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A8PA6NJQ4 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A7PA6NKC0 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A22PA8MWA6 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A12PA8MX19 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A5PA8MXJ8 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A23PA8MXZ1 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 RNF223E7ERA6 249 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 IGHV2-5P01817 119 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 WNT2P09544 360 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A15PP0C7V4 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A13PP0C7W8 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A14PP0C7W9 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM90A24PP0C7X0 464 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 SELLP14151 372 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 VEGFCP49767 419 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM189A2Q15884 450 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 ATAD3CQ5T2N8 411 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 NLRC3Q7RTR2 1065 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 ZNF561Q8N587 486 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 SAMD12Q8N8I0 201 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 ASCC1Q8N9N2 400 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 ZNRF1Q8ND25 227 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 OR8B3Q8NGG8 313 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 POM121Q96HA1 1249 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 OR8B2Q96RD0 313 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 REG4Q9BYZ8 158 aa19.66■□□□□ 0.74
TSPAN4-203ENST00000397397 METTL21EPA6NDL7 271 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 F5H0A9 414 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 PITPNBP48739 271 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 LMO4P61968 165 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 FAM89BQ8N5H3 189 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 CHST4Q8NCG5 386 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 TMEM185AQ8NFB2 350 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 MCFD2Q8NI22 146 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 RAB39BQ96DA2 213 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 SLC25A38Q96DW6 304 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 IFT22Q9H7X7 185 aa19.65■□□□□ 0.74
TSPAN4-203ENST00000397397 TMEM82A0PJX8 343 aa19.64■□□□□ 0.73
TSPAN4-203ENST00000397397 SLC33A1O00400 549 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-203ENST00000397397 NDUFB3O43676 98 aa19.64■□□□□ 0.73
TSPAN4-203ENST00000397397 LMO1P25800 156 aa19.64■□□□□ 0.73
TSPAN4-203ENST00000397397 UBE2NLQ5JXB2 153 aa19.64■□□□□ 0.73
TSPAN4-203ENST00000397397 BIVMQ86UB2 503 aa19.64■□□□□ 0.73
TSPAN4-203ENST00000397397 OR56B1Q8NGI3 324 aa19.64■□□□□ 0.73
TSPAN4-203ENST00000397397 SNX22Q96L94 193 aa19.64■□□□□ 0.73
TSPAN4-203ENST00000397397 A0A096LNT2 108 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 TRAV24A0A0B4J272 114 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 SOCS1O15524 211 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 HPGDSO60760 199 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 ZNF737O75373 536 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 BLVRBP30043 206 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 PAN3Q58A45 887 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 LRRC10Q5BKY1 277 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 NKAPLQ5M9Q1 402 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 SIGIRRQ6IA17 410 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 SPNS3Q6ZMD2 512 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 NEDD4LQ96PU5 975 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 C6orf62Q9GZU0 229 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 CHST6Q9GZX3 395 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 SPACA1Q9HBV2 294 aa19.63■□□□□ 0.73
TSPAN4-203ENST00000397397 A0A075B6Q4 140 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 H3BUI4 141 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 HSPB6O14558 160 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 DVL1O14640 695 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 PSPNO60542 156 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 PDCD6O75340 191 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 HEXAP06865 529 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 FUT3P21217 361 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 IL2RGP31785 369 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 SEC61A1P61619 476 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 LOXL1Q08397 574 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 CNPY1Q3B7I2 92 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms