RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 GMFBP60983 142 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 TUSC1Q2TAM9 212 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 STEAP3Q658P3 488 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 C9orf139Q6ZV77 190 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 NR2C2APQ86WQ0 139 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 OR10AC1Q8NH08 325 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 C22orf15Q8WYQ4 148 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 SEH1LQ96EE3 360 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 SDHCQ99643 169 aaPredicted RBP12.06□□□□□ -0.48
SEC13-208ENST00000397109 WDR13Q9H1Z4 485 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 GPR173Q9NS66 373 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 FOXJ3Q9UPW0 622 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 SLC7A11Q9UPY5 501 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 POLDIP2Q9Y2S7 368 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 V9GY05 133 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 MEGF11A6BM72 1044 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 OR2AT4A6NND4 320 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 J3QT63 122 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 AIPO00170 330 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 PIN1P1O15428 100 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 HPGDSO60760 199 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 RHBDL1O75783 438 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 PLATP00750 562 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 CALCBP10092 127 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 HAAOP46952 286 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 ZNF79Q15937 498 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 ODF4Q2M2E3 257 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 DMRTC1Q5HYR2 192 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 FAM27D1Q5T7N8 215 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 METTL11BQ5VVY1 283 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 HACD4Q5VWC8 232 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 ZNF788Q6ZQV5 615 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 OR5T2Q8NGG2 359 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 OR51A4Q8NGJ6 313 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 OR13C5Q8NGS8 318 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 ANGPTL6Q8NI99 470 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 FAM216AQ8WUB2 273 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 CNTD2Q9H8S5 307 aa12.05□□□□□ -0.48
SEC13-208ENST00000397109 RPUSD1Q9UJJ7 312 aaKnown RBP12.05□□□□□ -0.48
SEC13-208ENST00000397109 TRAV40A0A0B4J280 105 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 PQLC2LA1A4F0 135 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 IFITM5A6NNB3 132 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 SIGLEC5O15389 551 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 NOS1APO75052 506 aaPredicted RBP12.04□□□□□ -0.48
SEC13-208ENST00000397109 TOX4O94842 621 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 HLA-DQB1P01920 261 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 IGHV4-38-2P0DP08 117 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 AMY2BP19961 511 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 IL13RA1P78552 427 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 PITPNAQ00169 270 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 GPR157Q5UAW9 335 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 CNIH2Q6PI25 160 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 FAM216BQ8N7L0 139 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 SIGLECL1Q8N7X8 197 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 POC5Q8NA72 575 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 POC1AQ8NBT0 407 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 C15orf40Q8WUR7 153 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 PP6455Q8WZ26 134 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 PCGF1Q9BSM1 259 aa12.04□□□□□ -0.48
SEC13-208ENST00000397109 A0A1B0GW55 424 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 A6NIN4 97 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 FAM25AB3EWG3 89 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 FAM25CB3EWG5 89 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 FAM25GB3EWG6 89 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 FCN3O75636 299 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 ACAA1P09110 424 aaPredicted RBP12.03□□□□□ -0.48
SEC13-208ENST00000397109 DUX4L2P0CJ85 424 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 DUX4L3P0CJ86 424 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 DUX4L4P0CJ87 422 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 DUX4L5P0CJ88 424 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 DUX4L6P0CJ89 424 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 DUX4L7P0CJ90 424 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 CD37P11049 281 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 PSG2P11465 335 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 MMP9P14780 707 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 FSTP19883 344 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 GABRA2P47869 451 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 FUT6P51993 359 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 CAPZA1P52907 286 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 IKZF1Q13422 519 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 PDCD1Q15116 288 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 SMIM21Q3B7S5 101 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 PYHIN1Q6K0P9 492 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
SEC13-208ENST00000397109 BCL6BQ8N143 479 aaPredicted RBP12.03□□□□□ -0.48
SEC13-208ENST00000397109 OR8H2Q8N162 312 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.03□□□□□ -0.48
SEC13-208ENST00000397109 ZDHHC22Q8N966 263 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 LY6G5BQ8NDX9 201 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 TRMT10AQ8TBZ6 339 aaKnown RBP12.03□□□□□ -0.48
SEC13-208ENST00000397109 TMEM106AQ96A25 262 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 GAFA1Q96PS6 74 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 CHST5Q9GZS9 411 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 ZMAT3Q9HA38 289 aaKnown RBP12.03□□□□□ -0.48
SEC13-208ENST00000397109 CKLFQ9UBR5 152 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 DUX4Q9UBX2 424 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 ETV7Q9Y603 341 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 KPTNQ9Y664 436 aa12.03□□□□□ -0.48
SEC13-208ENST00000397109 IGHV3OR16-10A0A075B7F0 116 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms