RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 RAC3P60763 192 aa15.4■□□□□ 0.06
MCF2L-208ENST00000397030 PDZK1IP1Q13113 114 aa15.4■□□□□ 0.06
MCF2L-208ENST00000397030 SPRED2Q7Z698 418 aa15.4■□□□□ 0.06
MCF2L-208ENST00000397030 EID2BQ96D98 161 aa15.4■□□□□ 0.06
MCF2L-208ENST00000397030 HARBI1Q96MB7 349 aa15.4■□□□□ 0.06
MCF2L-208ENST00000397030 DIRC2Q96SL1 478 aa15.4■□□□□ 0.06
MCF2L-208ENST00000397030 A0A1W2PNV4 684 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 A0A1W2PRX2 142 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 PPP1CCP36873 323 aaKnown RBP15.39■□□□□ 0.05
MCF2L-208ENST00000397030 ACAA2P42765 397 aaKnown RBP15.39■□□□□ 0.05
MCF2L-208ENST00000397030 PJVKQ0ZLH3 352 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 MAP6Q96JE9 813 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 RAE1P78406 368 aaKnown RBP15.39■□□□□ 0.05
MCF2L-208ENST00000397030 TIAL1Q01085 375 aaKnown RBP eCLIP15.39■□□□□ 0.05
MCF2L-208ENST00000397030 COL10A1Q03692 680 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 LILRA6Q6PI73 481 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 ZNF841Q6ZN19 808 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 CBLN3Q6UW01 205 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 DUX5Q96PT3 197 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 TFAP2AP05549 437 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 C1QL3Q5VWW1 255 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 TBC1D26Q86UD7 250 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 TNFRSF12AQ9NP84 129 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 EVPLQ92817 2033 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 TEX50A0A1B0GTY4 177 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 ICMTO60725 284 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 LALBAP00709 142 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 NAT2P11245 290 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 AESQ08117 197 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 TGIF1Q15583 401 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 VAMP3Q15836 100 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 COMMD1Q8N668 190 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 STARD4Q96DR4 205 aa15.39■□□□□ 0.05
MCF2L-208ENST00000397030 RD3LP0DJH9 198 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 PMELP40967 661 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 GMPPAQ96IJ6 420 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-208ENST00000397030 CCL13Q99616 98 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 KCNK15Q9H427 330 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 SLC2A9Q9NRM0 540 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 KIAA1324LA8MWY0 1029 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-208ENST00000397030 HSBP1O75506 76 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 CELA2AP08217 269 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 SLC23A3Q6PIS1 610 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 TMEM88Q6PEY1 159 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 C16orf82Q7Z2V1 217 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 OR8B12Q8NGG6 310 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 YAE1D1Q9NRH1 226 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 NAT8BQ9UHF3 227 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 NKX2-2O95096 273 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 FAM122BQ7Z309 247 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 RTN4RQ9BZR6 473 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 CDC20Q12834 499 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 PMS2CLQ68D20 193 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 DHRS11Q6UWP2 260 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 PPP1R1CQ8WVI7 109 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 LURAP1Q96LR2 239 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 GABARAPL3Q9BY60 117 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 NTN4Q9HB63 628 aa15.38■□□□□ 0.05
MCF2L-208ENST00000397030 TAF1P21675 1872 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 SULT1A1P50225 295 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 TMEM229BQ8NBD8 167 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 MS4A10Q96PG2 267 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 LYSMD2Q8IV50 215 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 SNX22Q96L94 193 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 EDIL3O43854 480 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 PRSS1P07477 247 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 WNT5AP41221 380 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 RPEL1Q2QD12 228 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 CMPK2Q5EBM0 449 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 ZNF547Q8IVP9 402 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 SMIM12Q96EX1 92 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 SF3B6Q9Y3B4 125 aaKnown RBP15.37■□□□□ 0.05
MCF2L-208ENST00000397030 CD37P11049 281 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 TM4SF20Q53R12 229 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 AMMECR1LQ6DCA0 310 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 VSTM2AQ8TAG5 236 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 GATA6Q92908 595 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 GPR35Q9HC97 309 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 SH2D2AQ9NP31 389 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 OR5B21A6NL26 309 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 CLEC9AQ6UXN8 241 aa15.37■□□□□ 0.05
MCF2L-208ENST00000397030 ADAM11O75078 769 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 SNRPCP09234 159 aaKnown RBP15.36■□□□□ 0.05
MCF2L-208ENST00000397030 HIST1H1DP16402 221 aaKnown RBP15.36■□□□□ 0.05
MCF2L-208ENST00000397030 GAB4Q2WGN9 574 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 OR4P4Q8NGL7 312 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 SSMEM1Q8WWF3 244 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 NPAP1Q9NZP6 1156 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 MPC1Q9Y5U8 109 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 PRSS42Q7Z5A4 293 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 METTL26Q96S19 204 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 C19orf54Q5BKX5 351 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 UNQ9370/PRO34162Q6UXP9 181 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 GPR27Q9NS67 375 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 FAM106CPP0CH98 169 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 TIAM2Q8IVF5 1701 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 NRXN3Q9Y4C0 1643 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 C5orf52A6NGY3 159 aa15.36■□□□□ 0.05
MCF2L-208ENST00000397030 ZNF207O43670 478 aaKnown RBP15.36■□□□□ 0.05
MCF2L-208ENST00000397030 GSTZ1O43708 216 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms