RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 A6NIN4 97 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 SH2D1BO14796 132 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 ZFPL1O95159 310 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 IGHA1P01876 353 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 AMY1AP04745 511 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 AMY2AP04746 511 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 KRT8P05787 483 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 MYCNOSP40205 109 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 ATP1B3P54709 279 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 FLOT2Q14254 428 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 KPNB1Q14974 876 aaKnown RBP13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 NXNL2Q5VZ03 156 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 RNF144BQ7Z419 303 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 TMEM179BQ7Z7N9 219 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 RHOFQ9HBH0 211 aa13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 MRM2Q9UI43 246 aaKnown RBP13.92□□□□□ -0.18
EXOSC3-202ENST00000396521 A0A087X0M5 115 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 A0A1B0GX30 115 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 BUB1B-PAK6H3BSN5 160 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 PSPNO60542 156 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 CIB2O75838 187 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 CDK2P24941 298 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 CD24P25063 80 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 RPL23AP62750 156 aaKnown RBP13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 DGCR2P98153 550 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 KLHL22Q53GT1 634 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 TPRX1Q8N7U7 411 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 OR4D6Q8NGJ1 314 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 CANT1Q8WVQ1 401 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 TTTY10Q9BZA0 68 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 CHST6Q9GZX3 395 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 ADGRL4Q9HBW9 690 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 MOB4Q9Y3A3 225 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 HSPE1-MOB4S4R3N1 261 aa13.91□□□□□ -0.18
EXOSC3-202ENST00000396521 IGKV1-27A0A075B6S5 117 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 SULT1C4O75897 302 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 PRKACGP22612 351 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 PRKACBP22694 351 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 LMO1P25800 156 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 OR3A1P47881 315 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 SLC35B1P78383 322 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 PTGES3Q15185 160 aaKnown RBP13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 HLA-DRB5Q30154 266 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 CATSPERDQ86XM0 798 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 GID4Q8IVV7 300 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 YIPF7Q8N8F6 280 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 ZNF649Q9BS31 505 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 KRT84Q9NSB2 600 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 AMMECR1Q9Y4X0 333 aaPredicted RBP13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 U3KQK5 164 aa13.9□□□□□ -0.18
EXOSC3-202ENST00000396521 C3orf84H3BNL1 204 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 LY6LH3BQJ8 138 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 PRKYO43930 277 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 ENTPD6O75354 484 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 MMP23AO75900 390 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 CSN2P05814 226 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 UBCP0CG48 685 aaKnown RBP13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 PTGFRP43088 359 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 AADACL4Q5VUY2 407 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 C1orf146Q5VVC0 180 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 ETV3LQ6ZN32 361 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 OR2W3Q7Z3T1 314 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 SPATA24Q86W54 205 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 CHST4Q8NCG5 386 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 HMG20AQ9NP66 347 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 EXOSC4Q9NPD3 245 aaKnown RBP13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 RBFOX1Q9NWB1 397 aaKnown RBP13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 OR6C3Q9NZP0 311 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 RYR3Q15413 4870 aa13.89□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A18PA6NE21 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A16PA6NEW6 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A20PA6NIJ5 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 METTL15A6NJ78 407 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A9PA6NNJ1 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A12PA8MX19 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A5PA8MXJ8 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FGF16O43320 207 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 RPP14O95059 124 aaKnown RBP13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 OR2T7P0C7T2 308 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A15PP0C7V4 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A13PP0C7W8 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A14PP0C7W9 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 FAM90A24PP0C7X0 464 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 PRKACAP17612 351 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 OR3A4PP47883 348 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 MTCP1P56278 107 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 EFNB1P98172 346 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 PRAMEF5Q5TYX0 476 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 C10orf99Q6UWK7 81 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 LHFPL2Q6ZUX7 228 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 UTS2BQ765I0 119 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 HS3ST5Q8IZT8 346 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 TMEM163Q8TC26 289 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 SPSB1Q96BD6 273 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 P2RX4Q99571 388 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 WARS2Q9UGM6 360 aaKnown RBP13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 ENOPH1Q9UHY7 261 aa13.88□□□□□ -0.19
EXOSC3-202ENST00000396521 POMPQ9Y244 141 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms