RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 EIF2AK4Q9P2K8 1649 aaKnown RBP3.83□□□□□ -1.8
GABPB1-204ENST00000396464 PLEKHG1Q9ULL1 1385 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 KDM5CP41229 1560 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 DIP2CQ9Y2E4 1556 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 ZMYM4Q5VZL5 1548 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 IGHV4-30-2A0A087WSY4 118 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 A0A0G2JMP0 313 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 TSTD3H0UI37 97 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 REM1O75628 298 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 PPBPP02775 128 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 IL3P08700 152 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 CSF3P09919 207 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 TCN2P20062 427 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 FMO3P31513 532 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 CD70P32970 193 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 DRD3P35462 400 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 LGALS7P47929 136 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 SNAP25P60880 206 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 GNG3P63215 75 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 IFITM2Q01629 132 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 C1orf146Q5VVC0 180 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 LCN12Q6JVE5 192 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF774Q6NX45 483 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 UGT2A3Q6UWM9 527 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 DGAT2L6Q6ZPD8 337 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 OR4M2Q8NGB6 313 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 OR10G9Q8NGN4 311 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 OR13D1Q8NGV5 346 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 KCTD4Q8WVF5 259 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 TNFAIP8L1Q8WVP5 186 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 TAMM41Q96BW9 452 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 ZHX1-C8orf76Q96EF9 292 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 METTL26Q96S19 204 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 SUCNR1Q9BXA5 334 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 DEFB127Q9H1M4 99 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 MIXL1Q9H2W2 232 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF629Q9UEG4 869 aaPredicted RBP3.83□□□□□ -1.8
GABPB1-204ENST00000396464 RWDD2AQ9UIY3 292 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 FAM32AQ9Y421 112 aaKnown RBP3.83□□□□□ -1.8
GABPB1-204ENST00000396464 TMEM56-RWDD3S4R434 201 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 CAMTA1Q9Y6Y1 1673 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 ABCC5O15440 1437 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 KIAA1107Q9UPP5 1409 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 TRAPPC8Q9Y2L5 1435 aa3.83□□□□□ -1.8
GABPB1-204ENST00000396464 KIF24Q5T7B8 1368 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 CLTCQ00610 1675 aaKnown RBP3.82□□□□□ -1.8
GABPB1-204ENST00000396464 ZC3H13Q5T200 1668 aaKnown RBP3.82□□□□□ -1.8
GABPB1-204ENST00000396464 A2MP01023 1474 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 TRAV8-6A0A0B4J262 113 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 A0A1B0GXF2 115 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 PPP5D1E7EU14 171 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 H0Y9J4 135 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 M0QZK8 103 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 SAP18O00422 153 aaKnown RBP3.82□□□□□ -1.8
GABPB1-204ENST00000396464 PI15O43692 258 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 OR7C1O76099 320 aaPredicted RBP3.82□□□□□ -1.8
GABPB1-204ENST00000396464 S1PR2O95136 353 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 LINC00614P0C842 121 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 SCGB1A1P11684 91 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF708P17019 499 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 CXCL3P19876 107 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 CTRLP40313 264 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 VSX2P58304 361 aaPredicted RBP3.82□□□□□ -1.8
GABPB1-204ENST00000396464 SLC35A2P78381 396 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 INCA1Q0VD86 236 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 CDK10Q15131 360 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 TSNQ15631 228 aaKnown RBP3.82□□□□□ -1.8
GABPB1-204ENST00000396464 AVPI1Q5T686 147 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 OTPQ5XKR4 325 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 SPNS3Q6ZMD2 512 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 GALNT10Q86SR1 603 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 OR10D3Q8NH80 312 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 AIF1LQ9BQI0 150 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 KIFC1Q9BW19 673 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF717Q9BY31 904 aaPredicted RBP3.82□□□□□ -1.8
GABPB1-204ENST00000396464 GABARAPL3Q9BY60 117 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 ENY2Q9NPA8 101 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 BIN3Q9NQY0 253 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 ARMCX1Q9P291 453 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 OPTCQ9UBM4 332 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 TTC3P53804 2025 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 LRRK1Q38SD2 2015 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 ERBINQ96RT1 1412 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 SETD5Q9C0A6 1442 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 ARHGEF12Q9NZN5 1544 aa3.82□□□□□ -1.8
GABPB1-204ENST00000396464 ZBED9Q6R2W3 1325 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 VPS37CA5D8V6 355 aaPredicted RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 OR4C46A6NHA9 309 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 RPL37AP8A6NKH3 93 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 FAM159BA6NKW6 160 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 GPR31O00270 319 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 SPAG7O75391 227 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 PPP1R3DO95685 299 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 CYB5R3P00387 301 aaPredicted RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 GIPP09681 153 aaPredicted RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 SPNP16150 400 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 PSMB1P20618 241 aaKnown RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 CXCR1P25024 350 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 SLC6A1P30531 599 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 PRSS3P35030 304 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms